Brassica rapa (field mustard): 103869662
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Entry
103869662 CDS
T03449
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 19
KO
K05391
cyclic nucleotide gated channel, plant
Organism
brp
Brassica rapa (field mustard)
Pathway
brp04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103869662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
brp04040
]
103869662
Ion channels [BR:
brp04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103869662
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
103869662
NCBI-ProteinID:
XP_033147255
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Position
A05:complement(22027581..22032827)
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AA seq
748 aa
AA seq
DB search
MASPNENESDEFPMLRQFPEARSRALHSRNRSISFSDSTYSSNRVENSSGPRRTQSRPSP
SVHMSGPLYDTRRPDQSFFPPSPVQPPASSLSSSTVDIPSEEVVEALLKNANLLKSGQLG
MCNDPYCTTCPSYYNLQAAQFHTYGVVSDSRTQVNVTHNRQALHDYDRGWAKLFASYVRR
CVPGIINPHSKFVQMWTRFLAFSCLLSIFIDPAFVYLLLIRDDNKCTDIDWPKATLFLFL
RSMSDFIFFINILLQFRLAYVAPESRIVGAGQLVDHPRKIACNYLRGKFFLDVVIVYPVP
QLMILSILPKSEFEENAIIGIFLFQYIPKLYRLLPLIAGQTPTGFIFESAWSNFIINLLT
FILAGHAVGSFWYLAGLQRVNKCLLQAGNFTMDERRYLIDCTSGESYLRALWRDSESVNA
CFQDGGFSFGIYLNAANLTTQRNIFTRFSFSLFWGFQQISTLAGNQTPSYSVGEVYFTMG
IIGLGLLLFARLIGNMHNFLQALDRRRTEMMLRQRDVEQWMSHRLLPDDIRKRVREAERF
NWAATRGVKEELIFENMPDDIQRDIKRHLFKFLKKVWIFSLMDELILDAIRERLKQRRYI
RSSTVLRRKGLVEKMVFIVRGEMESIGEDGSVLPLSEGDVCGEELLTWCLERSSVDPDGT
RIKMPTKGLVSNRSVRCVTNVEAFSLSVADLEDVTSLFSRFLRSNRVQGAIRYESPYWRL
RAAMQIQVAWRYRRKRLERKKQNGDIDE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccgaacgaaaacgaaagcgacgagtttcccatgcttcgtcaatttccagaa
gcaagatctcgtgctttacactcgaggaatcgtagcatttccttctctgattcaacttac
tccagtaacagagttgaaaactcaagtggccctcgtcgaacacagagtagaccatctcct
tccgtgcacatgagtggtcctctttacgatactcgtagacctgatcagtctttcttccct
ccctctcctgttcaacctcctgcatcctccctctcctcctctaccgttgatattccttcc
gaagaagttgttgaagccctcttgaaaaacgcaaatctattgaaatctggacagctaggg
atgtgtaacgatccttactgtactacttgtccttcttactacaacctccaagctgctcag
tttcacacttacggagtagtttctgactctaggacccaagtaaatgttacacacaaccgc
caagctctgcatgattatgatagaggctgggctaagctgtttgcttcctatgttcgtaga
tgcgtacctggaatcataaatcctcattccaaattcgttcaaatgtggactcgtttctta
gccttttcatgcttgctgtctatctttatagatcctgccttcgtttacctcttattaatc
agagatgacaacaaatgcacagatattgattggcctaaggcgacattatttttgtttctg
agaagtatgtcggattttatattcttcattaacattcttcttcagtttcggttggcttac
gtagctcctgagtctagaatagttggtgctggccagttagttgatcatccaagaaaaatt
gcttgtaattacttgcgaggcaagttttttcttgacgtggtgatagtctatcctgtccca
cagctgatgatattatcgatactacccaagtcagaattcgaggagaacgctataattggc
atatttctattccagtacattccaaagctatacaggcttcttccacttattgctggacaa
acaccgaccgggttcatctttgagtcagcttggtctaattttataattaatcttctcacc
ttcattcttgctggtcatgctgttggttctttctggtatcttgcagggctccagagagtt
aacaaatgcttgttacaagctgggaattttacgatggatgaacgtagatatcttatagac
tgtacttctggggaaagctatctacgagctctctggagagatagtgagagtgttaatgct
tgttttcaagacggtggattttcatttgggatctatttgaatgcagccaatcttaccact
caacgtaatatcttcacaagattcagtttctctctgttttggggattccagcaaataagc
acacttgctggaaaccaaaccccaagttactcagtaggggaggtttactttacaatgggc
atcatcggactagggcttttgctttttgcgcggcttatcggtaacatgcataacttcctt
caagctcttgatagaaggaggacggaaatgatgctgagacagcgtgatgtggagcagtgg
atgagccatagactgttgccagacgatataaggaagagggtgcgagaggctgagcggttc
aattgggctgctactagaggagttaaagaggagctgatttttgagaatatgcctgatgat
attcagagagatataaaacgccatctcttcaagtttctcaagaaggtgtggatattttct
ttgatggatgaattgatcttagatgccatccgtgagaggctgaaacaaaggaggtacata
aggagtagcacggtgttgcgccgtaaaggtctagttgagaaaatggtattcatagtgaga
ggtgagatggagagcattggggaagacggttctgttctgccattgtcagaaggagacgtt
tgtggtgaagaactcctcacttggtgcctcgaacgctcttcggtagaccctgatgggacg
agaataaagatgccgacaaaaggtttggttagcaacagaagtgttaggtgtgtgacaaac
gtggaggcgttttcgctgagtgtagcagatcttgaagatgtaacgagtttgttctctaga
ttcctaaggagcaatcgagtgcaaggagccataaggtatgagtctccttattggaggcta
cgagcagctatgcagattcaagtggcttggagataccgaaggaaacgacttgagagaaaa
aaacagaatggtgacatagatgagtga
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