Bradyrhizobium cosmicum: S23_16520
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Entry
S23_16520 CDS
T01796
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
brs
Bradyrhizobium cosmicum
Pathway
brs00730
Thiamine metabolism
brs01100
Metabolic pathways
brs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
brs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
S23_16520 (thiC)
Enzymes [BR:
brs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
S23_16520 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BAL74869
LinkDB
All DBs
Position
complement(1736712..1738610)
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AA seq
632 aa
AA seq
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MNIRSNPEKTVPAVTTGPLPSSRKIFASPDAAPELRVPLREIILSEGAGEPNLPVYDTSG
PYTDPSVTIDVNAGLPRGRKAWVLERGGVEEYQGRQIKPEDNGSVSADKAARAFSAYHQP
LRGLDGHKITQLEFARAGIITKEMIYVAARENLGRKQQLERAEAALADGESFGASVPAFI
TPEFVRSEIARGRAIIPCNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCDGDPVKLTWELYKDT
LIEQCEQGVDYFTIHAGVRLQYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDE
ICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMIEGPGHV
PMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKVGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWSDQFNLGLD
PETAKNFHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAATLNDPNSIGMSLSGTA
EDGMKQMSAKFKEMGESLYLDAEKVKESNRVL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgctccaatcctgaaaaaaccgtccccgccgtcactaccggcccgctgccg
tcctcgcgaaagatcttcgcctcgcccgacgctgcgcccgagctgcgcgtgcccctgcgc
gagatcatcctctccgaaggcgcgggcgagccgaacctgccggtgtacgacacctcgggc
ccctacaccgatccgtccgtcaccatcgacgtcaacgccggcctgccgcgcggtcgcaaa
gcctgggtgctggagcgcggcggcgtcgaggagtatcagggccggcagatcaagccggag
gacaatggcagcgtctccgccgacaaggctgcgcgcgcgttcagtgcctaccaccagccg
ctgcgcggcctcgacggccacaagatcacccagctcgaattcgcccgcgccggcatcatc
accaaggagatgatctacgtcgccgcccgcgaaaacctcggccgcaagcagcagctggag
cgcgcggaagcagccctcgccgatggcgagagttttggcgcatcggtccccgccttcatc
accccggaattcgtgcgcagcgaaatcgcgcgcggccgcgccatcattccctgtaacatc
aatcacagcgaactcgagccgatgatcatcggccgcaacttcctcaccaagatcaacgcc
aatatcggcaactccgccgtgacgtcgtcggtcgaggaggaggtcgagaagatggtgtgg
gcgatccgctggggcgccgacaccgtgatggacctctccaccggccgcaacatccacacc
acgcgcgaatggatcctgcgcaactcgccggtgccgatcggcaccgtgccgatctaccag
gcgctggagaagtgcgacggcgatccggtcaagctgacctgggagctctacaaggacacg
ctgatcgagcaatgcgagcagggcgtcgactatttcaccatccacgccggcgtgcgcctg
caatacatccacctcaccgccagccgcgtcaccggcatcgtcagccgcggcggctcgatc
atggcgaagtggtgcctggcgcatcacaaggagagcttcctctacacccatttcgacgag
atctgcgacctcatgcgcaagtatgacgtctcgttctcgctcggcgacggattgcgcccg
ggctcgatcgcggacgccaacgaccgcgcgcagttcgcggagctcgagacgctcggtgag
ctgaccaagatcgcgtgggacaagggctgccaggtcatgatcgaaggccccggccacgtg
ccgatgcacaagatcaagatcaacatggacaagcagctcaaggagtgcggcgaggcgccg
ttctacacgctcgggcccctgaccaccgacatcgcgccgggctacgaccacatcacctcg
ggcatcggcgccgccatgatcggctggttcggctgcgccatgctctgctacgtcaccccg
aaggagcatctcggcctgcccgatcgcaacgacgtcaaggtcggcgtcatcacctacaag
atcgctgcccacgcaagcgatctcgccaagggccaccccgccgcgcagctccgcgacgac
gccctctcccgcgcccgcttcgacttccgctggagcgaccagttcaacctcggcctcgac
cccgagaccgcgaaaaacttccacgacgagaccctgccgaaggaagcccacaaggtcgcg
catttctgctcgatgtgcggccccaaattctgctcgatgaagatcacgcaggacgtgcgc
gactacgccgccacgctgaacgacccgaacagcatcggcatgtcgctgagcggcacggcc
gaggacggcatgaagcagatgagcgcgaagttcaaggagatgggcgagagcttgtatctg
gatgcggagaaggtgaaggagagcaatcgggtgttgtga
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