Brevibacillus sp. 7WMA2: GOP56_16765
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Entry
GOP56_16765 CDS
T06452
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
brw
Brevibacillus sp. 7WMA2
Pathway
brw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GOP56_16765 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brw03021
]
GOP56_16765 (rpoB)
03400 DNA repair and recombination proteins [BR:
brw03400
]
GOP56_16765 (rpoB)
Enzymes [BR:
brw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GOP56_16765 (rpoB)
Transcription machinery [BR:
brw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GOP56_16765 (rpoB)
DNA repair and recombination proteins [BR:
brw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GOP56_16765 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QIC07110
LinkDB
All DBs
Position
3957774..3961310
Genome browser
AA seq
1178 aa
AA seq
DB search
MAGKLVQSGKHRQRRTYSRINEVLGLPNLIEIQQKSYQWFLDTGLREMFQDISPIQDFTG
NLVLEFIDYSLGEPKYGVDESKERDVTYAAPLRVKVRLLNKETGEVKEQEVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYNTKIDKNGKQTFSATVIPNRGAWLELETDAKDII
YVRIDRTRKIPVTVLLRALGFGTDKDILDLLGHDEKFVNNTLEKDNTDSTEKALIEIYER
LRPGEPPTVENAKSLLISRFFDPKRYDLASVGRYKMNKKLHIKNRLFNQRLAETLIDKST
GEILAEAGQIIDRRVMEKILPMLEGGVNYVDVRTHGGVLENETITLQSIDIFDEEGKVVK
VIGNANIDMSVKHITPADIVSAINYFINLLHRVGTTDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSIQDQNQITPQALINIRPVIAAIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFARINDYGF
IETPRRKINPETGVVLSEIDYLTADEEDVYNVAQSNQPLAEDGRFANEMVICRRKGEILN
VPRDKVDFMDISPKQVVSVATALIPFLENDDANRALMGSNMQRQAVPLLIPQAPFVGTGM
EHKAAQDSGVAVVAKWPGKVERVTAREVTVRRYIEVDGKQVLGDLDKYKMHKFIRSNQGT
CINQRPIVMPGDIIEKGDIIGDGPSTEKGELALGRNVIVAFMTWEGYNYEDAILLSEKLV
KDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALKNLDERGIIRVGAEIRDGDIL
VGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGSGIVVDVKVFTRDNGDELP
PGVNQLVRVYIAQKRKISVGDKMAGRHGNKGVIARIMPEEDMPFLPDGSPVEIVLNPLGV
PSRMNIGQVLETHLGMAAKLLGIHVATPVFDGARQDDVLDTLEEAGLDRDGKTLLYDGRT
GESFDRRVTVGCVYMLKLAHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMDV
KILSGDEQEIEMRETDDEDEGTGEKLNLLPESIGAQDE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggtaaactggtccagagcggtaagcaccgccagcgtcgcacgtattctcgaatc
aacgaagtactgggactacctaacctaatcgaaattcagcaaaaatcctaccaatggttt
ttggatactggtttaagagaaatgttccaagacatttcgccaatccaagactttactggt
aatttagtgctggagtttattgattatagtcttggtgagcctaaatacggcgtagacgag
tcgaaggaacgtgatgtaacgtatgctgctccattgcgtgttaaagtacgtcttctaaac
aaagagacgggcgaagtgaaggagcaagaagtctttatgggagatttcccactgatgaca
gaaacgggtaccttcattataaatggagcggagcgcgttattgtcagtcagctcgttcgt
tcccctagtgtttactataacactaaaattgataagaacggtaaacagacttttagcgct
actgttattccgaaccgtggagcatggcttgaacttgaaaccgatgcgaaagatattatt
tatgtacgtatcgatcgtactcgtaaaattccagttacagtattacttcgtgctttaggt
tttggaactgataaagatattctagacctgctgggtcatgacgagaaattcgttaacaac
acgcttgaaaaagataacaccgattctactgagaaagctttgatcgaaatctatgagcgt
ttgcgtccaggtgaaccacctacagtagagaacgcgaagagcttattgatttctcgcttc
tttgatccaaagcgctatgatttagcatcagtaggtcgctataaaatgaacaaaaagctc
catattaaaaaccgcctattcaaccaacgtcttgctgagacgctgattgataaatcaaca
ggtgaaatccttgcagaagcaggtcaaattattgaccgtcgtgttatggaaaagattctt
cctatgttggagggtggcgtaaactatgtggacgtacgtacacatggtggagttttagaa
aatgaaacgattactcttcaatctatagatatctttgatgaagaaggtaaagtagttaag
gttatcggtaatgcgaatatagatatgtctgtaaagcatattactccagcagacatcgtt
tcggcaattaactattttattaacctactgcatcgtgtaggtactacagacgatatcgac
catttgggtaaccgtcgtctgcgttctgtaggtgaattgttacagaaccaattccgtatc
ggtctttctcgtatggaacgcgtggttcgtgaacgcatgtccattcaagatcaaaatcaa
attacaccgcaggctttgattaacatccgccctgtgattgcggcaatcaaagagttcttt
ggtagctcccagctttcacagttcatggatcaaacgaatccgcttgctgagttaacacat
aaacgccgtttgtccgcattaggacctggtggtttgacgcgtgaacgcgctggtttcgaa
gtgcgagacgtgcatcactctcactatggacgtatgtgtccgatcgagactccagaggga
ccaaacatcggtttgatcaactccttgtctacgtttgctcgtattaatgattacggcttt
attgaaacacctcgccgtaaaattaatcctgaaacaggcgttgtattgtctgagattgat
tacctgactgctgatgaagaggatgtatataacgtagctcagtcgaatcagccactagct
gaagatggcagatttgctaacgagatggttatttgccgccgtaaaggtgaaatccttaac
gttcctcgtgataaggtagactttatggacatctctcctaagcaggttgtatcggttgcg
acagcgttgattccgttccttgagaacgatgacgccaaccgcgccctaatgggatcaaac
atgcaacgtcaggccgttcctttgctaattcctcaagctccatttgtaggaactggtatg
gaacataaagcagcgcaagactccggtgttgcggttgttgcaaaatggcctggaaaagta
gagcgtgtaacagctcgcgaagtaactgttcgacgttatatagaggttgatggcaaacaa
gttcttggagacctagataaatataaaatgcacaaatttatccgttctaaccaagggact
tgcattaaccaacgtccgattgtaatgcctggcgatattatcgaaaaaggcgatattatc
ggtgatggtccgtccactgagaagggcgaattggcgcttggtcgcaacgttatcgtagcg
tttatgacttgggaaggttataactacgaggatgcgatcttgctaagtgaaaaactggtt
aaagatgacgtctacacgtccattcatattgaagaatatgaatcagaagcacgtgatacg
aaactaggaccagaagagattacacgcgatattccgaacgtaggggaagaggcgctgaag
aatcttgatgaacgtggtatcattcgcgttggtgccgagatccgcgatggcgatatcctg
gttggtaaagtaacgcctaagggtgtaacagagctaacagcagaagagcgtctattgcat
gcgatcttcggtgaaaaggcacgcgaagttcgtgatacatcactgcgtgtaccacacggt
ggctccggtattgttgttgatgtaaaagtatttacgcgcgacaatggcgacgaattgcct
ccaggtgttaatcaactagtgcgtgtatacattgctcaaaaacgtaagatttccgttggg
gataaaatggccggtcgacatggtaacaaaggggttattgcccgcatcatgccggaagaa
gatatgccgttcctaccggatggttctccagttgagatcgtcttgaatccactgggcgta
ccatcgcgtatgaacatcggtcaggtacttgaaacacatttaggtatggctgctaaattg
ttgggtattcacgtagcgactcctgtattcgacggtgcacgtcaagacgatgttcttgat
acgcttgaagaagctggattagaccgtgacggtaaaacccttctatacgatggccgtaca
ggtgaatcattcgatcgccgtgtaacagtaggttgcgtgtacatgctgaaactggctcac
ttggttgacgataagattcatgctcgttcaactggaccatactctcttgttacgcaacaa
ccattgggtggtaaagcccaatttggtggccagcgcttcggggagatggaggtatgggcg
cttgaagcatacggtgccgcatatactctgcaagagatcctcaccgttaaatctgacgat
gttgttggtcgtgttaaaacgtacgaagcgatcgttaaaggtgaaaacgtaccagaaccg
ggcgttccagaatcattcaaagtattgattaaagaacttcaaagcttaggtatggacgta
aaaattctctctggtgacgagcaggaaattgaaatgcgcgaaaccgatgatgaggatgaa
ggaactggagaaaagttaaatctcttacctgaaagcataggcgcacaagatgagtaa
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