Brachybacterium vulturis: CFK38_05600
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Entry
CFK38_05600 CDS
T05108
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brz
Brachybacterium vulturis
Brite
KEGG Orthology (KO) [BR:
brz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brz03032
]
CFK38_05600
03400 DNA repair and recombination proteins [BR:
brz03400
]
CFK38_05600
Enzymes [BR:
brz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFK38_05600
DNA replication proteins [BR:
brz03032
]
Prokaryotic type
DNA Topoisomerases
CFK38_05600
DNA repair and recombination proteins [BR:
brz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFK38_05600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
SBP_bac_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ATG51064
UniProt:
A0A291GM62
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All DBs
Position
complement(1263589..1266321)
Genome browser
AA seq
910 aa
AA seq
DB search
MTGGRHLVIVESPAKARTIGRYLGDEYDVKASVGHIRDIPVPRDLPAEMKKGPYGKFGVD
VENGFDPYYIVSPDKKKTVAELKKALKDADTLYLATDEDREGEAIAWHLLETLKPKKSLP
VKRMVFHEITEDAIRAALENTRDIDASLVDAQETRRILDRLVGFELSPVLWRKIKPSLSA
GRVQSVATRLVVERERERMAFVAADYWDITGSFAAEGGAEATAFTAKIATVDGARVASGS
DFADDGTLKPRSSSATILTEESAQTLVQVLGEAPATVTSLDSKPYTRRPAAPFTTSSLQQ
EASRKLRLGARQAMRVAQSLYENGFITYMRTDSVTLSGEAIRASRAQAAELYGSQYVPDK
PRYYQNKSQAAQEAHEAIRPAGDHFRTPAEVAGQLAGDEFRLYELIWKRTIASQMADAKG
TTSTVELLLEAAGRAATFRAAGTVITFRGFLAAYEEGRDAARYKDDDDKGSDKRLPQMEE
GQTLETRELAPDGHSTTPPPRFTEASLVRALEDRGIGRPSTYASTVATVQDRGYVLRRGT
ALVPSWTAFAVVRLLEEHFGPFIDYDFTAQMEQQLDRMAQGDLSRAEYLKNFYLSDGTDG
PIGLKPMVDDLGEIDARAINSIEIGEGITLRVGRYGAYVELVARNEDGTPVEGADPRRAN
VSDEVAPDELTVEKAKEMLERAKDDGRVLGTDPDSGHEIVAKDGRYGPYVTEILPAPEET
GGKKVPKSKQPKPRTGSLLKSMDLATVSLEDALKLLSLPRVVGTTEDGTEITAQNGRYGP
YLKKGTDSRSLETEEQIFSITMEEAEKIYAQPKTRGRAAAKPPLKELGTDPTSEKPIVIK
DGRFGPYITDGTTNVSLRATEKVEEISETIAVEKLAEKRAKGPATKKAPAKRAPGKKKTT
TAKKTTTAKK
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
gtgacaggcggacgacatctggtgatcgtcgagtccccggcgaaggcgcggaccatcggc
cggtatctcggggacgagtacgacgtcaaggcgtcggtgggccacatccgcgacatcccg
gtgcctcgtgacctgcctgccgagatgaagaaggggccgtacggcaagttcggcgtcgac
gtcgagaacggcttcgacccctactacatcgtcagtcccgacaagaagaagaccgtcgcg
gagctgaagaaggccctcaaggacgccgacaccctctacctcgccaccgatgaggaccgc
gagggcgaggccatcgcctggcacctgctggagaccctcaagcccaagaagtccctgccg
gtcaagcgcatggtgttccacgagatcaccgaggacgcgatccgggcggcgctggagaac
acccgcgacatcgacgcgagcctggtcgatgcgcaggagacccgccgcatcctggaccgc
ctggtgggcttcgagctctccccggtgctgtggcgcaagatcaagccctcgctgtcggcc
ggtcgcgtgcagtccgtcgccacccgcctggtggtcgagcgcgaacgcgagcggatggcc
ttcgtcgccgccgactactgggacatcaccggcagcttcgccgccgagggcggggccgag
gccaccgccttcaccgccaagatcgccacggtcgacggcgcccgggtcgcgagcggctcg
gacttcgccgacgacggcaccctgaagccgcgctcgagcagcgccaccatcctcaccgag
gagtccgcccagaccctggtgcaggtgctcggcgaggcccccgcgacggtgacctcgctc
gactccaagccgtacacccggcgtcccgcggcaccgttcaccacctcctcgctgcagcag
gaggcctcgcgcaagctgcgcctcggcgcccgccaggcgatgcgggtggcccagtcgctg
tacgagaacggcttcatcacgtacatgcgcaccgactcggtcacgctctccggtgaggcg
atccgtgcctcccgggcccaggccgccgagctctacggcagccagtacgtgccggacaag
ccccggtactaccagaacaagtcacaggcagcgcaggaggcgcacgaggcgatccgcccc
gcgggcgaccacttccgcacccccgccgaggtggccggccagctcgcgggcgacgagttc
cgcctctacgagctgatctggaagcgcaccatcgcctcccagatggccgacgccaagggc
accacctccaccgtcgagctgctgctggaggccgccggacgcgccgcgaccttccgcgcc
gccggcaccgtgatcaccttccgcggcttcctcgccgcgtacgaggagggtcgggacgcc
gcccgctacaaggacgacgacgacaagggctccgacaagcgcctgccgcagatggaggag
ggccagacgctcgagacccgcgagctggccccggacggccactccaccaccccgcccccg
cgcttcacggaggcctcgctggtgcgggcgctggaggaccgcggcatcggccgcccctcc
acctacgcctccacggtcgcgaccgtgcaggatcgcggctacgtgctgcgacgcggcacc
gcgctggtgcccagctggaccgccttcgcggtggtgcgcctgctcgaggagcacttcggg
ccgttcatcgactacgacttcacggcgcagatggagcagcagctggaccgcatggcccag
ggcgatctctcgcgtgcggagtacctgaagaacttctacctctccgacggcaccgacggc
cccatcgggctgaagcccatggtcgacgacctcggcgagatcgatgcccgggcgatcaac
tcgatcgagatcggggagggcatcaccctgcgggtgggccgctacggcgcctacgtcgag
ctggtcgcccgcaacgaggacggcaccccggtcgagggcgccgatccgcgtcgcgcgaac
gtctccgacgaggtcgcgcccgatgagctgaccgtcgagaaggcgaaggagatgctcgag
cgggccaaggacgacggccgggtgctgggcaccgatcccgactccgggcacgagatcgtc
gccaaggacggccgctacggcccctacgtcaccgagatcctgcccgctcccgaggagacc
ggtggcaagaaggtccccaagtcgaagcagccgaagccccgcacgggctcgctgctgaag
tcgatggacctggccaccgtctccctcgaggacgcgctgaagctgctgagcctgccgcgc
gtggtcggcaccaccgaggacggcaccgagatcaccgcccagaacggccgctacggtccg
tacctgaagaagggcaccgactcgcgctccctggagaccgaggagcagatcttctcgatc
accatggaggaggcggagaagatctacgcccagcccaagacccggggccgggccgccgcc
aagccgccgctgaaggagctcggcacggatcccaccagcgagaagccgatcgtgatcaag
gacggccgcttcggtccgtacatcaccgacggcaccaccaacgtctcgctgcgtgcgacg
gagaaggtcgaggagatctccgagaccattgcggtcgagaagctcgcggagaagcgcgcg
aaggggccggccacgaagaaggcccccgccaagcgcgctcccgggaagaagaagacgacg
accgcgaagaagaccacgacggcgaagaaatag
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