Bifidobacterium scardovii: BBSC_2316
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Entry
BBSC_2316 CDS
T03975
Name
(GenBank) glycosyl hydrolase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
bsca
Bifidobacterium scardovii
Pathway
bsca00511
Other glycan degradation
bsca00600
Sphingolipid metabolism
bsca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsca00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
BBSC_2316
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
BBSC_2316
Enzymes [BR:
bsca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
BBSC_2316
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR
Laminin_G_3
CTXphi_pIII-N1
Motif
Other DBs
NCBI-ProteinID:
BAQ32396
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All DBs
Position
complement(2802778..2805060)
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AA seq
760 aa
AA seq
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MTHLSHHIDRAWSTASLPESGGTLRATFRISSDGALLEAKAAERLVLGVSVACGSLRIEA
PEEGIVLDVEDTYGVQLGGVHDLHVTFGDFGTRIYVDGYQAFACATNICPSKYARKGMFV
CADEPGMRVERVECFAQAWTSERIQRNVPIPQPDIEFAAAYVAGKDIVALRAMKTGTVHA
QFRVRGLGQFGTIVAARTAEGQVLDVSIDDDGFVYRVLANGEWCEYRAFGSWNDGGWHDL
VVRAFRGAIDIYVDGNMEIHQPGQVFFADYPDLRHVSIGEDSFGVRLCGEVRSGGIYAYP
LMDGQIRKLSDVPPTTDTALFDKGYEGSASYRIPSLAVTPSGVTIAGADRRVVISNDAPN
EIHFVIRRSLDGGQTWLPLQTVIAFPGSGLDGACVIDSCMVCDRETGRVSVLVDHFPGGR
GFANVQRGIGLDEQGRLILHDSKGLEYLLRSDGIVTSRDGDATSYRVDDDGNVTCGGAPA
GNIYLKEGADPCESLLTARTSYVVEVHSDDDGETWSNPRHINHMIKEPWMGFLGTSPGNG
IQLSEGEHRGRLLVPYYCTGTSPKFNAGGALISDDGGRTWRRGKAINEGRTVNGEVVDEQ
DVHDDDATTHESVFVERSDGDVLCLFRNQHHLGRVGKAVSHDGGETWDTVEFDPMLPDIF
SQPNAVTVPAGERGCASDRIIFANASLMRPYRGCGVLRLSEDGGRTWKRNRCFNPYHYVY
QCMSVLPDGAIGLLWERETAGVYFTRLPLSWFGVEALESK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgacacatctctcccatcatatcgatcgggcgtggagtaccgcgtcgcttccggaatcg
ggaggaacgttgcgtgcgacgttccggatttcttcggacggcgccctgctggaggccaaa
gccgcggagcgtctcgtgctcggcgtttccgtcgcgtgcggctcgctgcggatcgaagcc
cccgaggaaggcatcgtgctggacgtcgaggacacctatggcgtgcaacttggcggcgtt
catgatctgcacgtcacattcggtgatttcggcaccagaatctacgtggacggatatcag
gcgttcgcctgcgcgaccaatatctgcccgtcgaaatacgcgcggaaaggcatgttcgtc
tgtgcggatgaaccaggcatgcgcgtcgaacgtgtggaatgctttgcgcaggcgtggact
tcggaacgcatccagcgcaatgtgccgattccgcagcccgatatcgagttcgcggcggcc
tatgtggccgggaaagacatcgttgcattacgcgcgatgaagaccggtacggttcatgcc
cagttccgggtgcgtgggcttgggcagttcgggacgattgtcgcggcaaggaccgccgaa
gggcaggttttggacgtttccattgacgatgatggattcgtttaccgggtgctggccaat
ggcgagtggtgtgagtaccgtgcgttcggatcttggaatgacggcggttggcatgatctg
gtcgtgcgcgcgttccgaggcgccattgacatctatgttgatggaaatatggaaatccac
cagccgggacaggtgttttttgccgattacccggatctgcggcatgtgtcgattggcgag
gactcctttggggtgcgtttgtgcggtgaagtgcggagcggcggcatctacgcgtatccg
ctcatggacgggcagattcgaaagctttcggatgttcctccgacgaccgacacggcgttg
ttcgataaggggtatgaaggttcggcaagctatcgcattccttcgttggccgttactccg
tccggcgtgacgattgcgggcgccgatcggcgtgtggtcatctccaacgacgcgcccaat
gagatccatttcgttatccggcgatccttggacggcgggcagacatggctgcctctgcag
accgttatcgcttttcccggcagcggactggatggcgcgtgcgtcattgattcctgcatg
gtctgtgaccgcgaaaccggccgggtatcggtacttgtcgaccatttcccgggaggaagg
gggtttgcgaatgtacagagaggaatcggcttggacgagcagggacgcctgatcctgcat
gattcgaaaggcctggagtacctcctgcggtccgacggtatcgtgacgtccagagacggt
gacgccacatcgtatcgggtggacgacgatggcaatgtgacgtgcggcggcgctcctgca
ggcaacatctatctcaaggaaggcgccgatccatgcgagagcctgctgaccgcgcgcacc
agctatgtggtggaggtgcattcggacgatgatggcgagacatggtccaatccgaggcat
atcaatcacatgataaaagagccgtggatgggatttctgggcacgtcgcccggtaacggc
atccagctcagcgagggagaacaccgggggcggctgcttgtcccgtattactgcaccgga
acgagtcccaagttcaatgccggtggcgcgctgatctccgatgatggcggccggacatgg
agacgcggcaaggccatcaacgaaggtcggacggtcaacggcgaagtcgtcgatgaacag
gatgtgcatgacgacgatgcgaccacgcatgaatcggtgttcgtggaacggtcggacggg
gacgtgctgtgcctgttccgcaaccaacaccatctgggcagagtgggcaaagcggtcagc
catgatggaggcgaaacatgggatacggtggagtttgacccgatgctgccggacatattc
agccagcccaatgcggtgacggtgccggctggggaacgcggatgcgcctcggaccggatc
atttttgccaacgccagcctgatgcggccgtaccgtggatgcggtgtgctgcgtttgagt
gaggacgggggcagaacctggaagcgcaatcgctgcttcaatccctaccattatgtctat
cagtgcatgtcggtcctgccggatggcgcgatcgggctgttgtgggaacgtgagacggct
ggtgtgtactttacgcgtctgccgttgagctggttcggcgtggaggcgctggaatccaaa
tag
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