Blastococcus saxobsidens: BLASA_5049
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Entry
BLASA_5049 CDS
T01752
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bsd
Blastococcus saxobsidens
Pathway
bsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BLASA_5049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsd03400
]
BLASA_5049
Enzymes [BR:
bsd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
BLASA_5049
DNA repair and recombination proteins [BR:
bsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BLASA_5049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CCG05822
UniProt:
H6RVZ2
LinkDB
All DBs
Position
4842424..4843236
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AA seq
270 aa
AA seq
DB search
MGLHPIGVHVGAGLSDEGQLEHGGPLARAAEVDADGVQIFLTDPQSYAAPEPRPDAGELS
SGDVMVVVHAPYLLNVASTNNRIRIPSRKLLDQHARAAAAVGARGLVVHGGHVLAKDDPS
AGADNWRKTFARQVEQGGFPVPVLIENTAGGGNAMARDLDAIGRLWDAVGEFGAGFVLDT
CHAWAAGWDLSTVVEAVRAVTGRIDLVHLNNSRDPAGSGRDRHAPLTDGEIPADLLFDVA
RRADCPIVLETPGDAASHAEEIALLRAALA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgggtctgcacccgatcggcgtacacgtgggcgccgggctcagcgatgagggtcagctc
gagcacgggggtcccctggcccgcgcggcggaggtggacgccgacggcgtccagatcttc
ctcaccgatccgcagagctacgcggcgccggagccccgccccgatgccggcgaactgagc
tccggtgacgtgatggtcgtggtccacgcgccgtacctgctcaacgtcgcgtcgacgaac
aaccgcatccgcatccccagccgcaagctgctcgaccagcacgcgcgggcggccgccgcc
gtcggcgcccggggcctggtcgtgcacggcgggcacgtgctggcgaaggacgacccgtcg
gccggcgcggacaactggcgcaagacgttcgcccgccaggtggagcagggtggcttcccg
gtgccggtgctgatcgagaacacggcgggcggcgggaacgccatggcccgggacctcgac
gccatcggcaggctctgggacgccgtcggcgagttcggtgccggcttcgtgctggacacc
tgccacgcctgggccgccggctgggacctgtccaccgtggtcgaggcggtgcgcgcggtc
accggccgcatcgatctggtgcacctcaacaacagccgcgatcccgccggctccgggcgg
gaccggcacgcacccctgaccgacggcgagatcccggccgacctgctgttcgacgtcgca
cggcgcgccgactgcccgatcgtgctggagacgcccggcgacgcggcgagccacgccgag
gagatcgccctgctgcgcgcggcgctggcctag
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