Bradymonas sediminis: DN745_18340
Help
Entry
DN745_18340 CDS
T05497
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
bsed
Bradymonas sediminis
Pathway
bsed00550
Peptidoglycan biosynthesis
bsed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bsed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DN745_18340 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bsed01002
]
DN745_18340 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bsed01011
]
DN745_18340 (dacB)
Enzymes [BR:
bsed01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DN745_18340 (dacB)
Peptidases and inhibitors [BR:
bsed01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DN745_18340 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
bsed01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DN745_18340 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Beta-lactamase2
OAD_gamma
Motif
Other DBs
NCBI-ProteinID:
AWV91178
UniProt:
A0A2Z4FRA7
LinkDB
All DBs
Position
complement(4839485..4841017)
Genome browser
AA seq
510 aa
AA seq
DB search
MKKIYYSYFIALALTAFSVPASAQRAPVQVEKAAPQATNPSAELRQKNERLKAAIEAALA
GSDVTQGKVGILAVDAATGQVLYARDADRSMSPASNTKLITVAAALDEFGPAHTFQTELL
AEGLDANGELVGDTLKGPLYIKGGGNAFLLYENFLDWANDLRLQGVKKIGGGIVVDNTLF
AGEDLPPLFDTKNEDAAYRAPIGALSVNFNGVTVLVDPGEKAGDAATYRFVPANKHIQVV
NRATTTSGRRRNIQVSSETIPATGDAEIGTRIVISGNIGLDARTFQSRRKRIDNPAQFAG
AVFIEALRAVGIEVAQKVSTGKTPAGAKVMVTHASQPLSYTAFATNKWSNNFMSEMLLRM
LGTTQGRAGTWAASQAAVLEFLQKSGIDTTDMVVKNGSGLYDGNRTSPRQFVELLRFMAT
HQWAPEYRASLAISGVDGTLARRLEDASVRGKIRAKTGTLNESAALSGYMRTATNREIAF
SIIFNDPPTFAWRYRPVQDRVAEAIEAFDD
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatctattattcatattttatcgcattggccctgaccgcatttagtgtaccg
gcgagcgcgcagcgggcgccggttcaggtcgaaaaggcggcgccgcaggcgaccaacccc
tcggccgagcttcgccaaaaaaacgagcgcctcaaagcggcgatcgaggccgcgctggcg
ggcagtgatgtcacccagggtaaggtcggcatcctcgccgtggacgccgcgaccgggcag
gttttatatgcgcgcgacgccgaccgctcgatgagcccggccagcaataccaagcttatc
acggtggcggcggcgctcgatgagttcggccccgcccacaccttccagaccgaattgctc
gccgaagggctcgacgccaacggcgagctggtcggcgataccctcaaaggcccgctctat
atcaagggcgggggcaacgcgtttttgctctacgagaacttcctcgactgggccaacgac
ctgcgcctgcagggcgtcaagaagatcgggggcggcatcgtggtcgataatacgctgttt
gccggcgaggatcttccgccgctctttgacaccaaaaacgaagacgccgcctaccgcgcg
cccatcggcgccctgtcggtcaacttcaacggcgtcaccgtgctggtggacccgggcgaa
aaggccggcgacgcggcgacctatcgctttgtcccggccaacaaacatattcaggtcgtg
aaccgcgcgaccacgaccagcgggcggcgccgaaatatccaggtcagctccgagaccatc
ccggccaccggcgacgccgagatcggcacccgcatcgtcatcagcggcaatatcgggctg
gacgcgcgcaccttccaaagccggcgaaaacgcatcgataaccccgcccaatttgccggc
gcggtcttcatcgaggcgctccgggcggtcggcatcgaggtcgcgcaaaaagtcagcacg
ggcaagacgcccgcgggcgcgaaggtgatggtcacgcacgcctcgcagccgctctcctac
acggcgtttgcgaccaataaatggagcaataacttcatgtccgagatgctcctgcgcatg
ctggggacgacccagggacgcgcgggaacatgggccgcgtcgcaggcggcggtgctcgaa
tttttgcaaaagtcgggcatcgacaccaccgatatggtcgtcaaaaacggcagcggtctc
tacgacggaaaccgcacctcgccgcgccaatttgtcgagctattgcgctttatggccacc
caccaatgggcgccggaataccgcgcctcgctggcgatctcgggcgtcgatggcaccctc
gctcgccgcctcgaagacgcgtcggtgcgcggtaaaatccgcgccaaaaccggcaccctc
aacgagtccgcggcgctgtcgggatatatgcgcaccgcgacgaatcgcgagatcgcgttt
tcgatcatcttcaacgacccgcccacctttgcctggcgctaccgcccggtgcaggaccgg
gtggccgaggccatcgaggctttcgacgactaa
DBGET
integrated database retrieval system
