Bradyrhizobium sediminis: KMZ68_24435
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Entry
KMZ68_24435 CDS
T08500
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bsei
Bradyrhizobium sediminis
Brite
KEGG Orthology (KO) [BR:
bsei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsei03019
]
KMZ68_24435 (hrpB)
Enzymes [BR:
bsei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KMZ68_24435 (hrpB)
Messenger RNA biogenesis [BR:
bsei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KMZ68_24435 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_C
HA2_N
AAA_30
AAA_19
Flavi_DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QWG18059
UniProt:
A0A975RSI2
LinkDB
All DBs
Position
complement(5127124..5129613)
Genome browser
AA seq
829 aa
AA seq
DB search
MPRSFDTPLPIDAVLDELARTLAADNSAVLVAPPGAGKTTRVPLALLDAPWIADRKIIVL
EPRRIAARASAERMAKTLGERVGDTVGYRVRFGSQVSRATKIEVVTEGIFSRQILDDPEL
SGVAAVLFDEFHERSLDADLGLALARDAQTGLREDLRILVMSATLDGARVAKLLGDAPVI
ASEGRAFPVETRYLGRKADAPLERQMADAIAMALRADPGSVLAFLPGAAEIRRTQNFLGE
RVHDASIEIVPLFGALDAGVQDRAIAPAPKGHRKVVLATSIAETSLTIEGVRIVVDSGVA
RVPRYEPDIGLTRLETVRASRAAVDQRRGRAGRTEPGVCYRLWDEPQTASLAAYTQPEIL
SADLSSLVLDLAQWGVSDPATLAFLDPPPAPALKEAKSLLHELGALDADGRITAEGKSLR
ALALPPRLARMIVDSHRLGAGEEAADIAAILTERGLGGDSADLDFRLDQFRRDRSQRASS
ARSLARRWAQQVAATEGRPGEDTSPSTGVMLAFAFPDRVAKNRGNGSFVLANGRGAAVDQ
TSALARAPYIAVAELTGTAAQGRILLAALITQAEIELRFADQIETADEISFDRGAMALRA
RRRKTLHAITLSEAPLALQPSADTARVLADGLVAAGLDRLPWSKALKQWRDRVMFLRKAE
GDTSQHSWPDLSDGALAAQREAWLAPVLYDKAALKDLSAGELSDALMGLLPWELRARLER
EAPTHFEAPTGTQLAIDYEAEQGPTIAVRLQELFGLNTHPSIAKGAVPLVLELLSPAHRP
VQVTRDLPGFWRGSYAAVRSDLRGRYPRHPWPEDPAHAAPTRRVKPRGT
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
ttgccccgcagcttcgacacgcccctcccgatcgacgcggttctcgacgagctggcccgc
acgctcgcggctgacaactcagcggtgctggtggcgccgccaggcgccggcaagaccacg
cgggtgccgctggcgctattggatgcgccctggatagccgacaggaagatcatcgtgctg
gagccgcggcggatcgcggcccgcgccagcgccgagcgcatggcaaagacattgggcgaa
cgcgtcggcgacaccgtcggctaccgcgtccgcttcggctcgcaagtatcgcgcgcgacg
aaaatcgaggtcgtcaccgagggcatcttctcgcggcagattctcgacgatccggaactg
tcgggcgtcgccgccgtgctgttcgacgagttccacgagcgctcgctcgatgccgatctg
ggcctcgcgctggcgcgtgacgcgcaaaccggtctgcgcgaggatctgcgcattctcgtg
atgtcggcgacgctcgacggcgcgcgggtggcaaaactgctcggcgacgcgccagttatc
gccagcgagggccgtgcctttccggtcgagacccgctatctcggccgcaaggccgatgcg
ccgctggagcggcagatggcggatgcgatcgcgatggcgctgcgcgccgatcccggctcg
gtgctggcgttcctgccgggtgctgccgaaatccgccgcacccagaatttcctcggcgag
cgcgtccacgacgcttcgatcgaaatcgtgccgttgttcggcgcgctcgatgccggggtg
caggaccgcgccatcgcgcccgccccaaagggtcatcgcaaggtggtgctggcgacttcg
atcgcggagacctcgctgaccatcgagggcgtgcgcatcgtggtcgattccggcgtggcg
cgggtgccgcgctacgagcccgatatcgggctgacgcggctggaaaccgtgcgcgcctcg
cgcgccgcggtcgatcagcgccggggccgcgccgggcgcaccgagcccggcgtctgctac
cggctatgggacgagccgcagaccgcctcgctcgccgcttacacccagcccgaaatcctt
tccgccgatctgtcgtcgctggtgctcgacctcgcgcaatggggcgtcagcgaccccgcg
acgctggcgtttctcgacccgccgccggcgccggcgctgaaggaagcgaaaagcctgctg
catgaacttggcgcgctcgacgccgacggaaggatcacggcggaaggcaagagcctgcgc
gcgctggcgctgccgccgcggctggcgcgcatgatcgtggattcgcatcggctgggcgcc
ggcgaggaagccgccgacatcgccgccatcctgaccgagcgcgggctcggcggcgacagc
gccgacctcgatttcaggctcgaccagttccgccgcgaccgctcgcaacgcgcttccagc
gcgcgcagcctcgcccggcgctgggcacagcaggtggcggccacggaggggcggcccggc
gaggatacttcgccttcaaccggcgtgatgctcgcctttgcctttcccgaccgggtcgcg
aagaaccgcggcaatggctccttcgtgctggccaacggccgcggcgccgccgtggaccag
acgtccgcgctggcgcgtgcgccctatatcgcggtcgccgaactgaccggcaccgcggcg
cagggccgcatcctgttggctgccctgatcacgcaggccgagatcgagctgcgctttgcc
gaccagatcgagaccgcggacgaaatttccttcgatcgcggcgcgatggcgttgcgggcg
cggcgcaggaagacgctgcacgcgatcacgctgtcggaggcccccttagcgctgcagccg
tcggccgataccgcacgggtgctggccgacgggctggtcgccgccgggctcgacagactg
ccatggtcgaaagcgctgaaacaatggcgcgaccgcgtgatgtttctgcgcaaggccgaa
ggcgacacgtcacagcattcctggcccgatttgtccgacggcgcgctggcggcgcagcgc
gaggcatggctggcgcctgttctctacgacaaggcggcgctgaaggatctttcggccggc
gagctgtccgatgcgctgatgggcctgctgccctgggaattgcgcgcgcgactggagagg
gaagcgccgacgcatttcgaggctccgaccggcacccagcttgcgatcgattacgaggcc
gagcaggggccgacgattgcggtccgcttgcaggaattgttcgggctcaacacccatccg
tcgatcgccaaaggcgcggtgccgctggtgctggaattgctgtcgcccgcgcaccggccg
gtgcaggtgacacgcgacctgccggggttctggcgcggcagctatgccgcggtgcgttcc
gacttgcgcgggcgctatccgcggcatccctggccggaagatcccgctcacgcggcgccg
acgcggcgggtcaagccgcggggaacttga
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