Burkholderia seminalis: WJ12_21560
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Entry
WJ12_21560 CDS
T04851
Name
(GenBank) hypothetical protein
KO
K21449
trimeric autotransporter adhesin
Organism
bsem
Burkholderia seminalis
Brite
KEGG Orthology (KO) [BR:
bsem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bsem02000
]
WJ12_21560
Transporters [BR:
bsem02000
]
Other transporters
Pores ion channels [TC:
1
]
WJ12_21560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_stalk
YadA_head
YadA_anchor
Phage_T7_tail
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
AOJ29787
LinkDB
All DBs
Position
2:complement(203550..207185)
Genome browser
AA seq
1211 aa
AA seq
DB search
MDTSNSTVAAQAGTAALAIGTNTSASGSYATAVGNSALASGNNSTALGFQASSAGGAAVA
VGNGANASGSHGVALGVNASASHTDSVALGAGAATDRNNSVSVGSSALRRQITNVAAGTQ
DTDAVNLGQMTAEFTKTNNAIAATNLTVSSLSTGLSTTSNAVAGLSTGLSATNSTVAGLS
TGLSSTNGTVAGLSTGLSATNSTVAGLSTGLSSTNSTVAGLSTGLSSTNSTVAGLSTGLS
STNSAVAGLSTGLSSTNSTVAGHTSQISDIDDKLSKLESGTSGLVQQANPGDDITVGANT
GGNAVDFSATGGTARTLKGVAAGDVSAASTEAVNGSQLHGVSDSVAAAIGGNSKVNSDGS
ISAPSFTIGDGSGGTKIVNSVGDVVTNLDGRVTTNEGDIKKLADDIGSGTLGLVQQPKPG
DDITVGANTDGNAVNFSSKTGARTLKGVAAGDVSAASTEAVNGSQLHGVSDSVAAAIGGN
SKVNSDGSISAPSFTVGDGSGGTKIVNSVGDVVTNLDGRTTTNEGDIKKLADDIGSGTLG
LVQQANPGDDITVGANTDGNAVNFSSKTGARKLAGVAAGDVSATSTEAVNGSQLHGVSDS
VAAAIGGNSKVNSDGSISAPSFTVGDGSGGTKIVNSVGDAVTNLDGRTTTNEGDIKKLAD
DIGSGTLGLVRQANPGDDITVGANTDGNAVNFSSKTGARKLAGVAAGDVSATSTEAVNGS
QLHGVSDSVAAAIGGNSKVNSDGSISAPSFTVGDGSGGTKIVNSVGDAVTNLDGRMTTNE
GGLKKLSEQFESGTLGLVQQNPTTGGITVGANTGGSVVNFTGTGGARVLSGVANGVDDDD
VVTVSQLRATGLIDYTGKEVGAVTYDSGLNFDTVTFAGTFGTKLQRVAAGEISATSMDAI
NGSQLFNLQEQFAKQYGELSGQFGDLSNRFDDLSDRLGELETNPGTGGPGTGDGSTVVGE
GAVATGENGSAIGDSALASGENSSAVGQGAVASGSNGSAIGQGSTASGSNSSAVGQGAVA
SGNNGSAIGQGSVASGENGTALGQGAVASGKDSTALGQGASATGSGSVAIGQGSVAAEAN
TVSFGNGTEEGNRRLVNIADGINASDAATKGQLDRAMESVDQRFNDTNRAINDVAKNAYA
GIAAAMAMPNMTPSQPGKTVVAVGAANFKSGSAIAAGATYRSRSGNWLVNGATSITSVGD
VGVRAQVGYEF
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atcgatacgagcaacagcacggtcgccgcgcaagcgggtacggccgcgcttgcgatcggc
acgaacacgagcgcctcgggatcttacgcgacggccgtcggtaacagcgcactcgccagc
ggcaacaacagcacggcactcggcttccaggccagcagtgcgggcggcgccgccgtcgcg
gtcggcaatggcgcgaacgcaagcggctcgcacggcgttgcactgggcgtcaacgcaagc
gcgtcccataccgattcggtggcgctcggcgccggcgcggccaccgatcgcaacaacagc
gtttcggtcggctcgtcggcgctgcgtcggcagatcaccaacgtggccgccggcacgcag
gacacggacgcggtaaacctcggccagatgacggccgagttcacgaagacgaacaacgcg
atcgccgcgaccaacctcacggtctccagcctgagcaccggcttgtcgacgacgagcaac
gcggttgccggcctgagcaccgggctctcggccaccaacagcaccgtcgcgggtttgagc
accggcctctcgtcgaccaacggcacggtcgccggcttgagcacgggcctctcggccacc
aacagcacggttgcgggcctgagcacgggcctctcatcgaccaacagcaccgtcgcgggc
ctgagcaccgggctctcgtcgaccaacagcaccgtcgcgggcttgagcaccgggctctcg
tcgaccaacagcgccgtcgcgggtttgagcaccgggctctcgtcgaccaacagcaccgtc
gccggacatacgtcgcagatcagcgacatcgacgacaagctgagcaagctcgagagcggg
accagcggtctcgtgcaacaggcgaatccgggggacgacatcacggtcggcgcgaacacc
ggcggcaacgccgtggacttcagcgcgaccggcggcaccgcacgcacgctcaagggcgtc
gcggcaggcgacgtgtcggccgccagcaccgaagccgtcaacggctcgcaactgcacggc
gtgtcggacagcgtcgcggcagcaatcggcggcaactcgaaggtgaactccgacggttcg
atctccgcgccgtccttcaccatcggcgacggcagcggcggcacgaagatcgtcaactcg
gtcggcgacgtcgtcaccaatctcgacggccgtgtcacgaccaacgaaggcgacatcaag
aagctcgccgacgacatcggcagcggcacgctcggtctcgtccagcagccgaagcccggc
gacgacatcaccgtcggcgcgaacaccgacggcaacgccgtgaacttcagcagcaagacc
ggcgcgcgcacgctcaagggcgtcgcggcaggcgacgtgtcggccgccagcaccgaagcc
gtcaacggctcgcaactgcacggcgtgtccgacagcgtcgcggcagcaatcggcggcaac
tcgaaggtgaactccgacggttcgatctccgcgccgtccttcaccgtcggcgacggcagc
ggcggcacgaagatcgtcaactcggtcggcgacgtcgtcaccaatctcgacggccgtacg
acgaccaacgaaggtgacatcaagaagctcgctgacgacatcggcagcggcacgctcggt
ctcgtccagcaggccaacccgggcgacgacatcaccgtcggcgcgaacaccgacggcaat
gccgtgaacttcagcagcaagaccggcgctcgcaagctcgcaggcgtcgcggcaggcgac
gtgtcggcaacgagtaccgaagccgtcaacggttcgcaactgcatggcgtgtccgacagc
gtcgcggcagcaatcggcggcaactcgaaggtgaactccgacggttcgatctccgcgccg
tccttcaccgtcggcgacggcagcggcggcacgaagatcgtcaactcggtcggcgatgcc
gtcaccaatctcgacggccgcacgacgaccaacgaaggcgacatcaagaagctcgctgac
gacatcggcagcggcacgctcggcctcgtccgacaggccaacccgggcgacgacatcacc
gtcggcgcgaacaccgacggcaatgccgtgaacttcagcagcaagaccggcgcccgcaag
ctcgcaggcgtcgcggcaggtgacgtgtcggcgacgagtaccgaagccgtcaacggttcg
caactgcatggcgtgtccgacagcgtcgcggcagcaatcggcggcaattcgaaggtgaac
tcggacggctcgatctccgcaccgtccttcaccgtcggcgacggcagcggcggcacgaag
atcgtcaactcggtcggcgacgccgtcaccaatctcgacggtcgcatgacgaccaacgaa
ggcggcctcaagaagctttccgagcagttcgaaagcggcacgctcggcctcgtccagcag
aatccgacgacgggcggcatcacggtcggcgcaaacaccggcggctcggtggtgaacttc
acgggcaccggcggcgcgcgcgtgctgtccggcgtcgcgaacggcgtggacgacgacgac
gtcgtgacggtgtcgcagctccgtgcaaccggactgatcgactacacgggcaaggaagtc
ggcgcggtcacgtacgactcgggcctgaatttcgacacggtgacgttcgccggcacgttc
ggcacgaagctgcagcgcgtcgccgctggcgaaatcagcgcgacgagcatggacgcgatc
aacggcagccagttgttcaacctgcaggagcagttcgcgaagcagtacggcgaactgagc
ggccagttcggcgacctgtcgaaccgcttcgacgatctgtcggaccgtctcggcgaactc
gaaacgaaccccggcacgggcggcccgggcacgggcgacggctcgaccgtcgtcggcgaa
ggcgcggtggcaacgggcgaaaacggctcggcgatcggcgacagcgcgctcgcgtccggc
gagaacagctcggctgtcggccagggggcggtcgcatcgggcagcaacggttcggccatc
ggccagggttcgacggcatcgggcagcaacagctcggccgtcggtcagggcgcggtcgcg
tcgggcaacaacggttcggccatcggccagggctcggtcgcgtcgggcgaaaacggcacg
gcgctcggccagggcgcggttgcatccggcaaggacagcaccgcactcggccagggcgca
tcggccaccggcagcggctcggtcgcaatcggccagggctcggtggcggcggaagccaac
accgtctcgttcggcaacggcacggaagaaggcaaccgccggctcgtcaacatcgcggac
ggcatcaacgccagcgacgcggccacgaagggccagctcgaccgcgcgatggaatcggtc
gaccagcgcttcaacgacacgaaccgcgcgatcaacgacgtcgcgaagaacgcgtatgcc
ggtatcgcggccgcgatggcgatgccgaacatgacgccgtcgcaaccgggcaagaccgtc
gtcgcggtcggcgccgcgaacttcaagagcggctcggcgatcgccgccggcgccacctac
cggtcgcgcagcggcaactggctcgtgaacggcgcgacgtcgatcacgtcggtcggcgac
gtgggtgtccgtgcgcaagtcggctacgagttctga
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integrated database retrieval system
