Bacillus subtilis subsp. subtilis RO-NN-1: I33_2488
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Entry
I33_2488 CDS
T01837
Name
(GenBank) sigma-54 interaction domain family
Organism
bsr
Bacillus subtilis subsp. subtilis RO-NN-1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
PAS_9
Sigma54_activ_2
HTH_8
PAS_4
PAS_8
AAA
PAS_10
AAA_2
AAA_5
Mg_chelatase
HTH_50
AAA_3
bpMoxR
PylC-like_N
AAA_16
DPCD
PglD_N
TrkA_N
ThiF
DUF815
Motif
Other DBs
NCBI-ProteinID:
AEP91440
LinkDB
All DBs
Position
complement(2353485..2355563)
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AA seq
692 aa
AA seq
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MQKVLIVGAGKRGTALLHILIKTAIIDIIAVVDKDPEAPGLKEAEQYGIAVSSDWKPYIQ
QKPDIVIHTTGDQAVFDELLQRKHEDTIVMPGKMAYIVFQLMEEKQHLIQMLKEQTYKYD
RIFNSTHDGMIFIDINEEIILFNHMAEKMVGKKREEVIGRPIKEVIPSTKMPRILKTRVP
EYNQKQLLGDHLQIVTTRLPIIDEGGRLLGALCVFKDITDAVELAEEVTNLKQVRTMLEA
IIQSSDEAISVVDENGIGLLINKAYTKMTGLSEKEVIGKPANTDISEGESMHLKVLETRR
PVRGVRMKVGPNEKEVIVNVAPVIVDGILKGSVGVIHDVSEIKMLTAELNRARQIIRTLE
AKYTFDDIIGKSEQMLVALEQAKLGAKTPATILLRGESGTGKELFAHAIHNESDRKYNKF
IRVNCAALSENLLESELFGYEDGAFSGAKRGGKKGLFEEANNGSIFLDEIGELTQNMQAK
LLRVLQEKEIVRVGGTKAIPVNVRVIAATNVNIEKAMADGTFREDLYYRINRYPISIPPL
RQRLEDIEALSVRLIQKINRDYGRNVKGLSQQALRALSAYHWPGNVRELENVLGRAMIFL
NPHMEWIEKDHLPVFELEQKENDTDQGTGFDFPDIEGEKLSVAVEKFEAHLIQQTLEKHH
FNRTKTAKALGVSIRNLYYKMDKYGLANEGMQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggtactgatagtaggtgccggcaaaaggggaacggcgttattacatattctg
attaaaacagccatcatagatatcattgccgtagttgacaaagaccccgaggcgccggga
ttaaaagaagcagaacagtatgggattgccgtttcatctgattggaaaccttacatacaa
caaaaaccggatatcgtcattcataccaccggcgatcaagccgtgtttgacgagctcctt
caaagaaagcatgaagataccattgtcatgccgggaaaaatggcatacatcgtttttcag
ctgatggaagaaaagcagcacctgattcaaatgctaaaagagcaaacctataaatatgac
agaatttttaattccacccatgatggaatgatttttattgatatcaatgaagaaatcatt
ctctttaaccatatggccgaaaaaatggtcgggaaaaaacgtgaggaagtcattgggcgc
ccaataaaagaagtgattccgagcacgaagatgccgcggattttaaaaacaagagtgcct
gaatacaaccagaagcagctgttaggcgatcatttgcaaattgtgaccacaaggctgccg
attattgatgaaggcggacgtctgctcggggctctttgtgtgtttaaagatatcactgat
gcggtcgagctggcagaggaagtgaccaacttaaagcaggtccgtacgatgctggaggca
attattcaatcctccgatgaggcgatttctgtcgttgatgaaaacggcatcggcctgcta
atcaataaagcgtatacgaaaatgacggggctttctgaaaaagaagtcatcggcaagcct
gcaaacactgatatttccgaaggcgaaagcatgcatttaaaggtgcttgaaacaagacgt
cctgtccgcggtgtcagaatgaaggtcggcccgaatgaaaaagaagtgatcgttaatgta
gcaccggtgattgtggacgggattttgaaaggcagcgtcggcgtgattcacgatgtttcc
gaaattaaaatgctgacagcggagcttaatcgcgccagacaaattattcgcacgcttgaa
gcgaaatacacgtttgacgacattatcggcaaaagcgagcaaatgctggttgcgcttgag
caggcgaagctcggtgcgaaaacaccggcaaccatcttgctgcgcggggaatcaggaaca
ggaaaagaactgttcgcccatgccatccataacgaaagtgaccggaaatacaataaattt
attcgcgtgaattgtgcagccctttctgaaaacctgctcgaatcagaattgttcggctat
gaggatggcgcattttcaggagcgaaacgcggcggtaaaaagggtttatttgaggaagca
aataacggcagtattttcttagatgaaatcggtgagctgacacaaaatatgcaggccaaa
ttgctacgcgtccttcaagaaaaggaaatcgtcagagtgggcggcacgaaagcgatccct
gtcaacgtcagagtgatcgcggcgacaaatgtaaatattgaaaaggcgatggcggacgga
acgttccgggaagacctttattaccggatcaaccgctatccgatctccattccgcctttg
cggcagcggttggaggacattgaagcactgagcgtcagacttatccaaaagatcaaccgg
gattacggcaggaatgtaaaagggctctcgcagcaagccttgcgcgccttatctgcctac
cattggcctgggaatgtcagggagcttgaaaatgtccttggacgagccatgatttttctg
aatccgcatatggaatggattgaaaaagatcacttgcctgtattcgaacttgagcaaaaa
gaaaatgacacagaccagggaacaggttttgattttccggatattgaaggcgaaaagctg
tctgtcgcagtagaaaaatttgaagcgcatttgatccagcaaacgcttgaaaagcatcat
tttaaccggacaaaaacagcaaaagctctcggtgtcagcattcggaacttatattacaaa
atggataaatatggccttgcaaatgaaggcatgcaataa
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