Bacillus subtilis subsp. subtilis 168: BSU04580
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Entry
BSU04580 CDS
T00010
Symbol
cshA
Name
(RefSeq) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bsu
Bacillus subtilis subsp. subtilis 168
Pathway
bsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSU04580 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bsu03019
]
BSU04580 (cshA)
03009 Ribosome biogenesis [BR:
bsu03009
]
BSU04580 (cshA)
Enzymes [BR:
bsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSU04580 (cshA)
Messenger RNA biogenesis [BR:
bsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSU04580 (cshA)
Ribosome biogenesis [BR:
bsu03009
]
Prokaryotic type
rRNA helicases
BSU04580 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Motif
Other DBs
NCBI-GeneID:
938170
NCBI-ProteinID:
NP_388339
Pasteur:
BG12085
UniProt:
P96614
A0A6M4JD28
LinkDB
All DBs
Position
511106..512641
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AA seq
511 aa
AA seq
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MVNHDITETAIRRSLNNLTITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDV
IGQAQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVL
PIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFI
DDIESILSNVPSEHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEV
QERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVA
LRKFKEGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMT
FITPREKSMLRAIEQTTKRKMDRMKEPTLDEALEGQQQVTVERLRTTISENNLNFYMTAA
AELLEDHDAVTVVAAAIKMATKEPDDTPVRLTDEAPMVSKRYKNQRSSKRRDGQGGGYRG
GKGKSNNRSSYDKKRSNDRRSSGDRRQKKSY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaatcacgacattactgaaacagcaattagaaggagtttgaataatttgactata
acgtttcaagattttaatttaagttctgatctcatgaaagcaattaatcgtatgggattt
gaagaagcaacaccgattcaggcacaaacgataccgctcggactttcaaataaagacgtc
attggacaagcgcaaacaggtacaggtaaaacagctgcgtttggtataccccttgttgaa
aaaattaaccccgagtctcctaatattcaagcaatcgtaatcgcgccaacccgtgaatta
gccattcaagtatctgaagaattgtataaaatcggacaagataaacgtgcgaaggttctt
cctatttacggcggacaggatattggacggcaaatccgggcgttaaagaagaatccgaat
attattgtcggaacacctggacgtcttcttgaccacatcaaccgccgcaccattcgttta
aacaatgtaaataccgttgtaatggatgaagcggatgaaatgctgaacatgggattcatt
gacgatattgaatctatcctttcaaacgtgccaagcgagcatcagacacttctgttctct
gccacaatgcctgcgccgatcaaacgcattgcagagcgcttcatgactgagccggaacac
gtaaaagtaaaagcgaaagaaatgacggtttctaacattcagcagttctatttggaagtg
caagaacgtaaaaaattcgatacactgactcgccttcttgatattcagtctcctgagctt
gcgatcgtattcggacgtacaaaacgccgtgtcgatgagctggctgaagctctgaacctt
cgcggatatgcagctgaaggtattcacggtgacttaacgcaggcgaaacgtatggttgcg
cttcgtaaatttaaagaaggcgcaatcgaagttctagtcgcaactgatgttgccgctcgc
ggacttgatatctcaggtgttacacacgtatacaacttcgacgtgcctcaagatcctgaa
agctacgttcaccgtatcggaagaacgggccgtgcaggaaaaacaggtatggcgatgacg
ttcattacaccgcgtgagaaaagcatgcttcgcgcaattgaacaaacaacaaaacgcaaa
atggaccgcatgaaggagcctacacttgatgaagcgttagaaggtcagcaacaggttact
gttgaacgtcttcgcacaacaatcagtgaaaacaacctgaacttctacatgacagcggca
gctgagctgcttgaagatcatgatgcagtaacagtggttgcggcggctatcaaaatggct
acaaaagagccagacgacacaccggttcgcttaacagacgaagcgccgatggtcagcaaa
cgctacaagaaccagcgctcttctaaacgcagagacggtcaaggcggcggctaccgcggc
ggaaaagggaaaagcaacaaccgttcttcctatgacaaaaagcgttcaaacgatcgccgt
tcttcaggtgacagacgccagaaaaaatcttactaa
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