Bifidobacterium subtile: BS3272_06520
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Entry
BS3272_06520 CDS
T07068
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
bsue
Bifidobacterium subtile
Pathway
bsue03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bsue00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BS3272_06520 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsue03400
]
BS3272_06520 (uvrB)
DNA repair and recombination proteins [BR:
bsue03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BS3272_06520 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BS3272_06520 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
UB2H
AAA_16
AAA_5
nSTAND3
ZapA
AAA_28
AAA_7
DUF87
Pox_A_type_inc
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
QOL35615
LinkDB
All DBs
Position
complement(1524407..1526518)
Genome browser
AA seq
703 aa
AA seq
DB search
MGFNIERADKPFVVKSPYHPSGDQPQAIDELAARIENGENDVVLMGATGTGKTATTAWLI
EKLQRPTLILEPNKTLAAQLCAEFRELMPDNAVSYFVSYYDYYQPEAYIPQTDTYIEKDS
NINDDVERLRHAATANLLTRRDCVVVATVSCIYGLGTPEEYAGRMLFLEEGQQIDRDTLL
RKFVDMQYKRNDIAFTRGTFRVRGDTVEIIPVYEELAVRIEFFGDEIDRISTLHPLTGDV
IAHEASVHIFPASHYVAGPERMERALKDIKNELDGRVAELHKQGKELEAQRLTMRTTYDL
EMLTQVGVCSGIENYSRHFDGRDPGTAPHTLLDFFPDDFLLVIDESHVTVPQIGAMYEGD
ASRKRTLVEHGFRLPSAMDNRPLKWPEFLQRVGQTIYLSATPGDYELGLSDGVVEQIIRP
TGLVDPKIEVRPIEGQIDDLLAEIKDRVARHERTLVTTLTKKMAEDLTDYLLERGIKVEY
LHSDVDTLRRVELLRELREGKIDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSYRSL
IQTIGRAARNVSGTVLMYADEMTDAMHKAIDETNRRRDKQIAYNTEHGIDPQPLIKKISD
VNDMLAKEDVDTQTLLEGGYRNAGKAGNTHLGLPNFNQDEADKRHEEILKAGLPAQDLAD
LIRQMSEQMHTAAEQLQFELAARLRDEIRDLKKELRQITEAQK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgggattcaatatcgagcgcgcggacaagcccttcgtcgtcaaatcgccctaccatcct
tcgggcgaccagccgcaggccatcgacgagctggcggcgcgcatcgagaacggcgagaac
gacgtggtccttatgggcgcgacgggaaccggcaaaacggcgaccaccgcatggcttatc
gagaagctgcaacgccccacgctgatcctggagccgaacaagaccctcgccgcgcagctg
tgcgccgaattccgcgagctcatgcccgacaacgccgtgagctatttcgtgtcatattac
gactactaccagcccgaagcctacattccgcagacggacacctacatcgagaaggattcg
aacatcaacgacgatgtggagcggctgcgccatgcggccaccgccaatctgctcacccgg
cgcgattgcgtcgtcgtggccacggtctcctgcatctacggcctgggcacgcccgaggaa
tacgccggccgcatgctcttcctggaagagggccagcagatcgatcgcgatacgctgctg
cgcaaattcgtcgatatgcagtacaagcgcaacgacatcgccttcacgcgcggcaccttc
cgcgtgcgtggcgacaccgtcgagatcattccggtctacgaggagctcgccgtgcgcatc
gagttcttcggtgacgagatcgatcgcatctcgaccttgcatccgcttaccggcgacgtg
atcgcccatgaggcatccgtccatatcttccccgcctcgcactatgtggccggccctgaa
cgcatggaacgggccttgaaagacatcaaaaacgaacttgatggccgcgtcgccgagctg
cacaagcagggcaaggaattggaagcccagcggctgacgatgcgcacgacctatgacttg
gagatgctcacgcaggtgggtgtgtgctccggcattgaaaattattcgcggcatttcgac
ggccgcgaccccggcaccgcgccgcatacgctgcttgatttcttcccggacgacttcctg
ctggtcatcgacgaatcgcatgtcaccgtgccccagatcggcgcgatgtacgagggcgat
gccagccgcaagcgcaccttggtcgagcacggtttccgcctgccctccgcgatggacaac
cggccgctcaaatggcctgagtttctgcagcgcgtcggtcagaccatctacctgtccgca
acgcccggcgactacgagctggggctttcggacggcgtcgtggagcagatcatccgcccg
accggtctggtcgaccccaagatcgaagtgcgcccgatcgaggggcagatcgacgacctg
ctcgccgagatcaaggaccgcgtcgccaggcacgagcgcaccttggtgacgacgctgact
aagaagatggccgaggatctgacggactacctgctggagcgcggcatcaaggtcgaatac
ctgcattccgacgtcgacacgctgcgccgcgtggagctgctgcgcgagctgcgcgaaggc
aagatcgacgtcatcgtgggcattaacctgctgcgcgaaggcctggacctgccggaagta
tcgttggtggcgattctcgatgccgacaaggaaggcttcctgcgctcctatcgctcgctc
atccagacgatcggacgcgcggcccgcaacgtgtcgggtaccgtgctcatgtacgccgac
gagatgaccgacgcgatgcacaaggccatcgacgagacgaatcgccggcgcgacaagcag
atcgcctacaacaccgagcacggcatcgacccgcagccgctcatcaagaagatcagcgac
gtcaacgacatgctcgccaaggaggacgtcgacacccagaccctgctcgaaggcggctac
cgcaatgccggcaaggcgggcaacacgcatctgggcttgccgaacttcaaccaggacgag
gccgacaagcgccatgaggagatccttaaggccggactgcccgcgcaggatctcgcggac
ctgattcggcagatgagcgagcagatgcacaccgccgccgagcagctgcaattcgagctc
gcagcccgtctgcgcgacgagattcgcgatctcaaaaaggagctgcgccaaatcaccgag
gcgcagaagtga
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