Bacillus subtilis XF-1: C663_1087
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Entry
C663_1087 CDS
T02459
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease (subunit A)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bsx
Bacillus subtilis XF-1
Brite
KEGG Orthology (KO) [BR:
bsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bsx03400
]
C663_1087 (addA)
Enzymes [BR:
bsx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C663_1087 (addA)
DNA repair and recombination proteins [BR:
bsx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C663_1087 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
DEAD
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AGE62915
UniProt:
A0AA86DHU9
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All DBs
Position
1144479..1148177
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AA seq
1232 aa
AA seq
DB search
MNIPKPADSTWTDDQWNAIVSTGQDILVAAAAGSGKTAVLVERMIRKITAEENPIDVDRL
LVVTFTNASAAEMKHRIAEALEKELVQRPGSLHIRRQLSLLNRASISTLHSFCLQVLKKY
YYLIDLDPGFRIADQTEGELLGDEVLDELFEDEYAKGEKAFFELVDRYTTDRHDLDLQFL
VKQVYEYSRSHPNPETWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRA
LELTKAPGGPAPRADNFLDDLAQIDELIQHQDDFSELYKRVPAVSFKRAKAVKGDEFDPA
LLDEATDLRNGAKKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLVISYGKRFEAAK
QEKSIIDFSDLEHYCLAILTVENDKGEREPSEAARFYQEQFHEVLVDEYQDTNLVQESIL
QLVTSGPEETGNLFMVGDVKQSIYRFRLAEPLLFLSKYKRFTESGEGTGRKIDLNKNFRS
RADILDSTNFLFKQLMGGKIGEVDYDEQAELKLGAAYPDNDETETELLLIDNAEDTDASE
EAEELETVQFEAKVIAKEIRKLISSPFKVYDGKKKTHRNIQYRDIVILLRSMPWAPQIME
ELRAQGIPVYANLTSGYFEAVEVAVALSVLKVIDNPYQDIPLASVLRSPIVGADENELSL
IRLENKKAPYYEAMKDYLAAGDRNDELYQKLNTFYGHLQKWRAFSKNHSVSELIWEVYRD
TKYMDYVGGMPGGKQRQANLRVLYDRARQYESTAFRGLFRFLRFIERMQERGDDLGTARA
LSEQEDVVRLMTIHSSKGLEFPVVFAAGLGRNFNMMDLNKSYLLDKELGFGTKYIHPQLR
ISYPTLPLIAMKKKMRRELLSEELRVLYVALTRAKEKLFLIGSCKDHQKQLAKWQASASQ
TDWLLPEFDRYQAKTYLDFIGPALARHRDLEDLAGVPAHADISDHPARFAVQMIHSYDLL
DDDLEERMEEKSERLEAIRRGEPVPGSFAFDEKAREQLSWTYPHHEVTQIRTKQSVSEIK
RKREYEDEYSGRAPVKPADGSILYRRPAFMMKKGLTAAEKGTAMHTVMQHIPLSHVPSIE
EAEQTVQRLYEKELLTEEQKDAIDIEEIVQFFHTEIGGQLIGAKWKDREIPFSLALPAKE
IYPDAQEADEPLLVQGIIDCLYETEDGLYLLDYKSDRIEGKFQHGFEGAAPILKKRYETQ
IQLYTKAVEQIAKTKVKGCALYFFDGGHILTL
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcctaaaccggcagacagcacatggacagatgaccaatggaatgccattgtt
tcaaccggccaggatattcttgtggcagcggctgcgggctctggtaaaaccgctgtgctc
gttgaacgaatgattcggaaaatcactgcggaggaaaacccaatagatgtagaccgtctt
ctcgttgtgacatttacaaacgcctcagcggcagagatgaagcaccgaatcgcagaagcc
ttggaaaaagagcttgtacagcgccccggctcgctgcatattagacgccagctgtctctt
ttaaaccgggccagcatttcgacgctccattccttttgcctgcaagtgctgaagaaatat
tactacttgattgatcttgatccgggctttcggatagctgatcagacggaaggcgagctg
ctcggggatgaagtgcttgacgagctgtttgaagacgaatacgcaaagggcgaaaaggcg
ttttttgagcttgttgaccgctatacgacagaccggcacgatctggatctgcaatttctc
gttaaacaggtgtacgagtattcccgatcccatcccaacccggagacgtggctggaaagc
tttgttcatttgtatgatgtatcagaaaagagcgccatcgaggagctgccgttttatcaa
tatgtcaaagaagatattgcaatggtgcttaacggggcgaaggaaaagctcttgcgcgcg
cttgagctgacgaaagcgccgggcggcccggcgccgcgtgctgacaattttcttgatgat
cttgcgcagattgatgaactgattcagcatcaggacgatttcagtgaactatataagcgg
gtgcccgccgtctcttttaagcgtgccaaagcagtaaaaggggatgagttcgatccagcg
ctccttgatgaggcgacagatttgagaaacggcgcaaaaaaactgcttgaaaagctcaaa
accgactactttacgagaagtcctgaacagcacttgaaaagcctagccgagatgaagcct
gtcattgaaacgctcgtacagcttgtcatcagctatggaaaacgattcgaagctgcgaaa
caggaaaaatcaatcatcgatttttctgatttggagcattactgtttagcgattttgaca
gttgagaatgacaaaggtgaacgtgagccgagcgaggctgcaaggttttatcaggaacag
tttcatgaagtgctcgttgacgaatatcaggataccaacctcgtgcaggaatcgattctg
cagctcgtcacaagcgggccggaggagactggtaacctgtttatggtaggagacgtcaaa
cagtcgatttatcgattcaggctcgcggagccgcttcttttcctttctaaatacaaacgg
tttacagagagcggagaaggcacggggcggaaaatcgatttaaataaaaatttccgaagc
cgggctgatattttagacagcacaaactttttatttaaacagctgatgggcggcaaaatc
ggtgaggtcgattatgacgagcaggctgagctgaagcttggtgcagcgtatccggacaat
gacgagacggaaacagagctgctgctgatcgacaacgcagaagatacggatgcaagcgag
gaagcagaagagcttgaaacggtgcagtttgaggcaaaagtcatcgctaaggaaatccgc
aagctgatttcatcgccatttaaggtgtatgacggaaaaaagaaaacacatcgcaatatt
caataccgagatatcgtgattttgctccgttcgatgccgtgggctccgcaaatcatggag
gagctgagagcacagggcataccggtttacgccaatttaacgtcaggctattttgaagcg
gtcgaagtcgccgtcgcgctttctgtgctgaaggtgattgataatccgtatcaggatata
ccgcttgcctctgtgctgcgctcaccgattgtcggagcagatgaaaacgagctgtctttg
atccggcttgaaaataaaaaagcgccgtactatgaggcgatgaaagactacctggctgct
ggtgaccggaacgatgagctttatcaaaagttaaatacgttttacggacatctgcaaaaa
tggcgcgcgttttcgaaaaaccactcagtatctgagctgatttgggaagtgtaccgcgac
accaaatatatggattatgtcggcggcatgccgggcggaaaacagcgccaggccaatttg
cgtgttctttatgacagggcgcgtcaatatgaatcaacggcatttcgcggcttgttccgt
ttcctgcggtttatcgaacgcatgcaggagcggggcgatgatcttggtacggcgagagcg
ctcagcgagcaggaggatgttgtccgcttaatgacgatccacagcagcaaagggctcgaa
tttccagtcgtgtttgcagcgggtctcggccggaatttcaacatgatggatttaaataaa
tcgtacctgctggacaaggagctcgggttcggcacgaagtatattcatccgcaattgcgc
atcagctatccgacacttccgctcattgcgatgaagaaaaaaatgcgcagggagctgctg
tcagaggaattgcgtgttctctatgttgcattaacgagagcgaaggaaaagctgtttctg
attggctcatgtaaggatcatcagaaacagcttgcaaaatggcaggcatccgcgtcccaa
actgattggcttctgccggaatttgaccgctatcaggcgaaaacgtatctagatttcatc
gggccggctcttgccaggcacagagacttggaggatttggctggtgtgccagctcacgct
gatatctcagatcacccggctcgttttgccgttcaaatgatccattcctatgatttgctt
gatgatgatctggaagaaagaatggaagaaaaaagcgagcgcctagaagcgattcgccga
ggtgaaccagttcccggctcgtttgcgtttgatgaaaaagcccgcgagcagctgagctgg
acatacccgcatcacgaggtgacgcaaattcggacaaagcaatcggtttctgagatcaaa
agaaaaagagagtacgaggatgaatacagcggcagggcccctgtaaaaccggctgatgga
agcattctgtacagacgtcccgcttttatgatgaaaaaaggcctgacagctgcagagaaa
gggactgccatgcatacggttatgcagcatatcccgctgtcacatgtaccgtcgatagaa
gaagctgagcagacggttcaaaggctttatgaaaaagagcttctcactgaagaacaaaaa
gacgctattgatatagaagaaatcgtgcaatttttccatacagaaatcggcggacagctg
atcggcgctaagtggaaggaccgggaaataccattcagcttagcgcttccggccaaggag
atctatcctgatgcacaggaggcggatgagccgcttttagtgcagggtatcattgactgt
ctctatgaaactgaggacggattatatctattggattataagtcggaccggattgagggc
aaattccagcatggatttgaaggagcggccccgatcttgaagaaacgatatgaaacgcaa
attcagctgtacacaaaggcagttgagcaaattgcaaaaacaaaggtaaagggatgtgcg
ctttatttctttgacggggggcacattctcacattatag
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