Bradyrhizobium symbiodeficiens: CIT39_20055
Help
Entry
CIT39_20055 CDS
T06284
Name
(GenBank) TrmJ/YjtD family RNA methyltransferase
KO
K02533
tRNA/rRNA methyltransferase [EC:2.1.1.-]
Organism
bsym
Bradyrhizobium symbiodeficiens
Brite
KEGG Orthology (KO) [BR:
bsym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bsym03016
]
CIT39_20055
Transfer RNA biogenesis [BR:
bsym03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CIT39_20055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
DUF559
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
AWM08504
UniProt:
A0A2U8QE87
LinkDB
All DBs
Position
complement(4868909..4870102)
Genome browser
AA seq
397 aa
AA seq
DB search
MSGTDKSKAGLSLDGPIVILVEPQLGENIGMAARAMGNFALGALRIVNPRDGWPNIAAQR
AAAGADHILEKVQLFGTVEDAVADLDLLFATTARPHDQAKPVVGPEAAAGEIAGHVAAGG
KAGILFGRERWGLTNEEVGLSNRIITFPVNPGFASLNLAQAVLLVGYEWFKRATSGELPH
AMPERSERASQHQMQAFFDNLIRELDKVEFLRPAEKRDTMLVNLRNIFTRMEPTKQDMHT
LHGVIMAIAEGRKGPAKGGVLDGEQATRLRALLAEHGSGTPDSGSTVRGLARLLRRNPTD
AERLLWQALTRDRRFAGGFKRQTPVGRHIPDFVSFPHRIAIELVNPGEGEAIAADRAGRR
TWLEARDYRVLEIRAADVERDLEAELVRLQGMIEQGA
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggactgacaagagcaaggcgggtttgtccctcgacggtcccatcgtgatcctg
gtcgagccgcagctgggcgaaaacatcggcatggccgcgcgcgccatgggcaattttgcg
cttggcgccttgcgcatcgtcaaccccagggacggctggcccaacatcgccgctcagcgc
gccgcggccggcgccgatcacatcctggaaaaggtccagttgtttgggacggtcgaagac
gccgtcgccgacctcgacctgctgttcgccaccaccgcgcgcccccacgaccaggccaag
cccgtggtcgggccggaagcggcggccggcgagatcgcgggtcacgtcgcggccggtggc
aaggccggcatcctgttcggccgcgagcgctggggactgaccaacgaggaggtcggcctc
tccaaccgcatcatcaccttcccggtcaatccgggtttcgcctcgctcaacctcgcccag
gccgtgctgctggtcggctatgaatggttcaagcgggcgacctcaggcgagctgccgcac
gccatgccggagcggtccgagcgcgcctcgcagcaccagatgcaggccttcttcgacaac
ctcatccgcgaactcgacaaggtggaattcctgcgcccggccgagaagcgcgacaccatg
ctggtcaacctgcgcaacatcttcaccaggatggagccgaccaagcaggacatgcacacc
ctgcacggggtgatcatggcgatcgcggagggacgcaagggcccggccaagggcggtgtg
ctcgacggcgagcaggccacgcgcctgcgcgcgctgctcgccgagcatggcagtggaacg
cccgacagcggctcgaccgtccgtggtctggcccgcttgctccgccgcaacccgaccgac
gccgagcgcctgctctggcaggccctgacccgcgaccgccgcttcgccggcgggttcaag
cgccagaccccggtggggcgccatatcccggacttcgtctccttcccgcaccggatcgcg
atcgagctggtcaacccgggcgagggcgaggcaatcgcggcagatcgtgcgggccggcgg
acgtggctggaggcgcgggattatcgcgtgctggagatccgggcggcggatgtcgagcgc
gatctggaggcggagctggtgcggctgcaggggatgatcgagcagggcgcatga
DBGET
integrated database retrieval system
