Burkholderia thailandensis E264: BTH_I3076
Help
Entry
BTH_I3076 CDS
T00311
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
bte
Burkholderia thailandensis E264
Pathway
bte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTH_I3076 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bte03021
]
BTH_I3076 (rpoB)
03400 DNA repair and recombination proteins [BR:
bte03400
]
BTH_I3076 (rpoB)
Enzymes [BR:
bte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTH_I3076 (rpoB)
Transcription machinery [BR:
bte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTH_I3076 (rpoB)
DNA repair and recombination proteins [BR:
bte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTH_I3076 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
UbiD
Motif
Other DBs
NCBI-ProteinID:
ABC37846
UniProt:
Q2SU19
LinkDB
All DBs
Position
I:complement(3513157..3517263)
Genome browser
AA seq
1368 aa
AA seq
DB search
MQYSFTEKKRIRKSFAKRSIVHQVPFLLATQLESFSTFLQADVLPAQRKSEGLQAAFTSV
FPIVSHNGFARLEFVSYALSSPAFNIKECQQRGLTYCSALRAKVRLVLLDKESPSKPVVK
EVKEQEVYMGEIPLMTPTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKAIGLTPEQILANFFVFDNFTLMDE
GAQMEFVPERLRGEVARFDITDREGKVIVQKDKRINAKHIRDLEAAKTKYISVPEDYLLG
RVLAKNVVDGDTGEVIANANDEITEGVLDKLREAKIKEIQTLYTNDLDQGPYISSTLRVD
ETVDKTAARIAIYRMMRPGEPPTEEAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGRDEI
TGPMTLQDDDILATIKILVELRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLVRVERA
VKERLGQAESENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALG
PGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAHLNEYGFLETPYRKV
VDSKVTDQIDYLSAIEEGRYMIAQANAAISNDGSLVDELVSSREAGETMMVTPDRIQYMD
VAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTVAVDSGT
TVQALRGGVVDYVDAGRIVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPIVKMG
DKVARGDVLADGASTDLGELALGQNMLIAFMPWNGYNFEDSILISERVVADDRYTSIHIE
ELNVVARDTKLGPEEITRDISNLAEVQLGRLDESGIVYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQQIIDDELK
RYRLDLNDQLRIVEGDAFQRLARMLVGKVANGGPKKLAKGTKIDQAYLEDLDHYHWFDIR
LADDEAAAQLEAIKNSIEEKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKIVPVEDMPYMADGRPADVVLNPLGVPSRMNVGQVLEVHLGWAA
KGLGWRIGEMLARQTKIEELRVFLTKIYNESGRAEDLESFSDDEILELAKNLREGVPFAT
PVFDGATEEEMSKMLDLAFPDDIAEQLDMNPSKNQVRLYDGRTGEPFERRVTVGYMHYLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVTGRTKVYENLVKGDHVIDAGMPESFNVLVKEIRSLGIDIDLDRN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcaatattccttcaccgagaagaagcgcattcgcaagagtttcgcgaagcgttccatc
gttcaccaagtgcctttcctgctggccacccagcttgaatcattcagcacatttctgcaa
gccgatgtgctgcccgcgcaacgcaagtccgaagggttgcaggccgccttcacgtcggtg
tttcccatcgtctcgcacaacggcttcgctcgtctcgagttcgtgagctatgcgttgtcg
tcgccggcattcaacatcaaggaatgccagcagcgcggcctgacctattgctcggcgctg
cgcgcgaaggtgcgcctcgtgctcctcgacaaggagtcgccgagcaaacccgtcgtcaag
gaagtaaaggaacaggaagtgtacatgggcgaaattccgctcatgacgccgaccggttcg
ttcgtcatcaacggtaccgagcgcgtgatcgtttcgcagctgcaccgctcgccgggcgtg
ttcttcgagcacgacaagggcaagacgcacagctcgggcaagctgctgttctccgcgcgg
atcattccgtaccgcggctcgtggctagacttcgaattcgatccgaaggacgtgctgtac
ttccgcgtcgaccgccgtcgcaagatgccggtcacgatcctgctgaaggcgatcggcctc
acgccggagcagatcctcgcgaacttcttcgtcttcgacaacttcacgctgatggacgaa
ggcgcgcagatggagttcgtgcccgagcgcctgcgcggcgaagtcgcacgcttcgacatc
accgatcgtgaaggcaaggtcatcgtccagaaggacaagcggatcaacgcgaagcacatt
cgcgatctcgaagccgcgaagaccaagtacatctcggtgcccgaagactatctgctcggc
cgcgtgcttgcgaagaacgtcgtcgacggcgatacgggcgaagtgatcgcgaacgccaac
gacgagatcacggaaggcgtgctcgacaagctgcgcgaagcgaagatcaaggaaatccag
acgctctacacgaacgatctggaccagggtccgtacatctcgtcgacgctgcgtgtcgac
gaaaccgtcgacaagacggccgcgcgcatcgcgatctaccggatgatgcgtccgggcgag
ccgccgacggaagaagccgtcgaggcgctgttcaatcgcctgttctacagcgaagacgcg
tacgacctgtcgaaggtcggccgcatgaagttcaaccgccgcgtcggccgtgacgaaatc
accggcccgatgacgctgcaggacgacgacatcctcgcgacgatcaagattctcgtcgag
ctgcgcaacggcaagggcgaagtcgacgacatcgaccacctcggcaaccggcgcgtgcgc
tgcgtcggcgaactggcggaaaaccagttccgcgcgggcctcgtgcgcgtcgaacgcgcg
gtgaaggagcgcctcggccaggccgagagcgaaaacctgatgccgcacgacctgatcaac
tcgaagccgatttcgtcggcgattcgcgagttcttcggctcgtcgcagctgtcgcagttc
atggaccagaccaacccgctgtcggaaatcacgcacaagcgccgcgtttccgcactgggc
ccgggcggtctgacgcgcgagcgcgcgggcttcgaagtccgcgacgtgcacccgacccac
tacggccgcgtgtgcccgatcgaaacgccggaaggtccgaacatcggtctcatcaactcg
ctcgcgctgtatgcgcacctgaacgaatacggcttcctcgagacgccgtaccgcaaggtc
gtcgacagcaaggtgaccgaccagatcgactatctgtcggcgatcgaggaaggccgctac
atgatcgcgcaggcaaacgcggcgatcagcaacgatggctcgctcgtcgacgaactcgtg
tcgtcgcgtgaagccggcgaaacgatgatggtcacgccggaccgcatccagtacatggac
gtcgcgccgtcgcagatcgtgtcggttgcagcctcgctgattccgttcctcgagcacgac
gatgcgaaccgtgcgctgatgggctcgaacatgcagcgtcaggccgtgccgtgtctgcgt
ccggagaagcccgtcgtcggtaccggcatcgagcgtaccgtggcggtcgactcgggcacg
acggtgcaggcgttgcgcggcggcgtcgtcgattacgtcgacgcgggccgtatcgtcatt
cgcgtgaacgatgacgaagcggtcgcgggcgaagtcggcgtcgacatctataacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaatcagcgtccgatcgtgaagatgggc
gacaaggtcgcgcgcggcgacgtgctggccgacggcgcgtcgacggacctgggcgagctc
gcgctcggccagaacatgctgatcgcgttcatgccgtggaacggctacaacttcgaggat
tcgatcctgatctcggagcgcgtcgtcgcggacgatcgctacacgtcgatccacatcgaa
gagttgaacgtcgtcgcacgcgacacgaagctcgggccggaagaaatcacgcgcgatatc
tcgaacctcgcggaagtccagcttggccgtctcgacgaatcgggcatcgtgtacatcggt
gcggaagtcgaagcgggcgacgtgctggtcggcaaggtgacgccgaagggcgaaacccag
ctgacgccggaagagaagctgctgcgcgcgatcttcggcgagaaggcgtcggacgtgaag
gacacgtcgctgcgcgtgccgtcgggcatgagcggcacggtgatcgacgtccaggtgttc
acgcgtgaaggcatccagcgcgacaagcgtgcgcaacagatcatcgacgacgaactgaag
cgctaccgcctcgacttgaacgaccagctgcgcatcgtggaaggcgacgcgttccagcgt
ctcgcacgcatgctcgtgggcaaggtcgcgaacggcggaccgaagaagctcgcgaagggc
acgaagatcgaccaggcatacctggaagacctcgaccactaccactggttcgacatccgc
ctcgcggacgacgaggcagccgcgcaactcgaagcgatcaagaactcgatcgaagagaag
cgtcaccagtttgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgctgaagatggtcaaggtgtacctcgcggtgaagcgccgtctgcag
cctggcgacaagatggcgggccgtcacggtaacaagggcgtcgtgtcgaagatcgtcccg
gtcgaagacatgccgtacatggcggacggccgtccggccgacgtcgtgctgaacccgctc
ggcgtgccgtcgcggatgaacgtgggtcaggttctggaagtgcacctcggctgggcggcg
aagggcctcggctggcgtatcggcgagatgctcgcgcgtcagacgaagatcgaggaactg
cgtgtgttcctgaccaagatctacaacgagtcgggccgtgcggaagacctcgagagcttc
agcgacgacgagatcctcgaactcgcgaagaacctgcgcgaaggcgtgccgttcgcgacg
ccggtgttcgacggcgcgaccgaagaagaaatgtcgaagatgctcgacctcgcgttcccg
gacgacatcgccgaacagctcgacatgaacccgtcgaagaatcaggtgcgcctgtacgac
ggccgcacgggcgagccgttcgagcgccgcgtgacggtcggctacatgcactacctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgttcgacgggcccgtactcgctcgtc
acgcagcaaccgctcggcggcaaggcgcagttcggcggccagcgtttcggtgaaatggaa
gtgtgggcgctcgaagcgtatggcgcttcgtacgtgctgcaggaaatgctgacggtgaag
tcggacgacgtgaccggccggaccaaggtttatgagaacctggtcaagggcgaccatgtc
atcgatgccggcatgcccgagtcgttcaacgtgttggtgaaggaaatccggtcgctcggt
atcgacatcgacctggaccggaactaa
DBGET
integrated database retrieval system
