Brochothrix thermosphacta: CNY62_05940
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Entry
CNY62_05940 CDS
T05089
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bths
Brochothrix thermosphacta
Brite
KEGG Orthology (KO) [BR:
bths00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bths03032
]
CNY62_05940 (gyrB)
03400 DNA repair and recombination proteins [BR:
bths03400
]
CNY62_05940 (gyrB)
Enzymes [BR:
bths01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CNY62_05940 (gyrB)
DNA replication proteins [BR:
bths03032
]
Prokaryotic type
DNA Topoisomerases
CNY62_05940 (gyrB)
DNA repair and recombination proteins [BR:
bths03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CNY62_05940 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ATF25980
UniProt:
A0A1D2L125
LinkDB
All DBs
Position
1246183..1248123
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AA seq
646 aa
AA seq
DB search
MTDKHLNDIDNNGGDYDASQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEIVDNAIDE
ALAGYCDEIHITIEPDNSITVVDNGRGIPVGIQEKTGRPAVEVIFTVLHAGGKFGGGGYK
VSGGLHGVGASVVNALSTKLEVTVSRDGQLYYQSFERGKVMEDMSIIGETEGRGTKVHFY
PDDEIFTETTDFDFDTLAVRTRELAFLNKGLTLIIEDKREEKPAKKKYYYEGGIKSYVEF
LNGKKELLHEEPIYTEGEKDGITVEVAMQYNGGFASNIMSYANNIHTYEGGTHESGFKIA
LTRVVNDYSRKQKLLKEAEPNLTGDDIREGLTAIISIKHPDPQFEGQTKTKLGNSETRNI
TDRLFSAAFEKFLMENPDVGRKIVEKGIIASRARIAAKRAREVARKKSGLEISSLPGKLA
DCSSRKPDLSELFIVEGDSAGGSAKQGRDRMFQAILPIRGKILNVEKASLDRILANEEIR
TIFTAMGTGFGGEFDVAKSRYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPLIEAGYVYI
AQPPLYKIAYGRKEHYVYSDKELETFLATLPENTKYGLQRYKGLGEMNAEQLWETTMDPE
HRVLLQVKLADAIEADETFEMLMGDRVDPRRQFIEENAEYVDNLDI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaacatctaaatgatatcgataataatggtggggattacgatgcaagtcag
attcaagtattagaaggattagaagctgttcgtaaacgtccaggtatgtatattggatca
acaagtgcacgtggacttcaccatttagtttgggaaatcgtcgataatgcaattgatgaa
gcactggcaggttattgtgatgaaatacatattacaattgaaccagataacagtattaca
gttgtcgataatggtcgtggaatccctgttgggatccaagaaaaaacgggtcgaccagca
gtagaagttatctttacagtcttacatgccggaggtaaattcggtggtggtggatataaa
gtttctggtggtttacacggtgttggggcttctgttgttaatgctttgtcaacaaaatta
gaagttactgtttctcgagacggccagttgtattaccaatcatttgaacgtggtaaagta
atggaagacatgtcaatcattggtgaaactgaaggtcgtggaacaaaagtccatttttat
cctgatgatgaaattttcactgaaacaactgactttgactttgatacattagcagttcgt
acacgagaacttgctttcttaaataaaggtttaactctgattattgaagataaacgtgag
gaaaaaccggctaagaagaaatattactatgaaggtggtattaaatcttacgttgagttc
cttaatgggaaaaaagaattgttacatgaagaacccatttatacagaaggcgaaaaagac
ggtataactgtcgaagtagctatgcaatataatggtggatttgctagcaatattatgtcg
tacgcgaataatattcatacgtatgaagggggtacacatgagtcaggttttaaaattgca
ctgacacgtgttgttaacgactactcacgtaagcaaaaattattaaaagaggctgaacca
aacttaacgggtgacgatatccgtgaaggattgacagcaattatttcaattaaacaccct
gatccacagtttgaaggacaaactaaaacaaaactggggaactctgaaacacgtaatatt
acagatcgtttgttctcagccgcatttgaaaaattcctcatggaaaatccagatgtaggt
cgcaaaattgttgaaaaaggaattatcgcttctcgtgcaagaatcgcagcaaaacgtgcg
cgtgaagttgctcgtaagaagagcggtttagaaatatcaagcttgccaggtaaattagcg
gattgttcatcacgtaaacctgatttgagtgaactttttatcgtcgagggtgactcggct
ggtggttctgctaaacaaggtcgtgatcgtatgttccaagctattctacctattcgtggg
aaaattcttaacgttgagaaagcaagtttagatcgcatcttagccaacgaagaaattcgt
acaatatttacagcaatgggaactggttttggtggcgagtttgatgtcgcaaaatcacgt
tatcataaattggttattatgacggatgctgatgtagatggtgcacatattagaacgtta
ttattaacgctattttatcgttatatgcgcccactcatcgaagctggttatgtttatatc
gcacaaccaccgctgtataagattgcttatggtcgtaaagaacattatgtatacagtgat
aaggaattagaaacgttcttagcaactctccctgaaaacactaaatatggcttacaacgc
tataaaggtttaggagagatgaatgccgagcaactatgggaaacaacaatggatcctgaa
catcgtgtcttgttgcaagtgaagttagcggatgcaattgaagcagatgaaacatttgag
atgttaatgggagatcgcgtagatcctcgtcgtcaatttatcgaagaaaatgcagagtac
gttgataaccttgatatttaa
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