Bacillus thuringiensis serovar thuringiensis IS5056: H175_ch2860
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Entry
H175_ch2860 CDS
T02474
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
btht
Bacillus thuringiensis serovar thuringiensis IS5056
Pathway
btht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H175_ch2860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
btht03019
]
H175_ch2860
03400 DNA repair and recombination proteins [BR:
btht03400
]
H175_ch2860
Enzymes [BR:
btht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H175_ch2860
Messenger RNA biogenesis [BR:
btht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H175_ch2860
DNA repair and recombination proteins [BR:
btht03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H175_ch2860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HTH_40
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_7
A-ATP_synth_H_N
GerE
HTH_45
HEM4
HTH_10
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AGG01573
UniProt:
M1PLH2
LinkDB
All DBs
Position
complement(2840932..2843049)
Genome browser
AA seq
705 aa
AA seq
DB search
MFTKAQELLASYFGYSSFRRGQDETIKNVLDGKDTVCIMPTGGGKSICYQIPALVFEGTT
LVISPLISLMKDQVDTLVQNGISATYINSSISIAEANQRIQLAKQGHYKLLYVAPERLDS
MEFVDQLIDMKIPMIAIDEAHCISQWGHDFRPSYLHIHRILDYLPEKPLVLALTATATPQ
VREDICNTLEINQENTIMTTFERENLSFSVIKGQDRNAYLADYIRQNQKESGIIYAATRK
VVDQLYEDLMKAGVSVSKYHAGMSDSDRNEQQELFLRDEVSVMVATSAFGMGIDKSNIRY
VIHYQLPKNMESYYQEAGRAGRDGLDSTCILLYSSQDVQVQRFLIDQSTGESRFSNELEK
LQNMTDYCHTEQCLQSFILQYFGEEPKEDCGRCGNCTDNRESIDVTRESQMVLSCMIRTN
QRFGKQMIAQVLTGSKNKKVIEFNFHTLPTYGLLSNRSVKEVSEFIEFLISDELIAVEHG
TYPTLKVTEKGKEVLLGKENVLRKERVETRQIVQDHPLFEVLREVRKEIAQGEGVPPFVI
FSDQTLKDMCVKMPQSDSELLTVKGIGEHKLVKYGSHFLQAVQHFIEENPNYAETIKTEV
VSERKKSGKASANSHLETYEMYKQGIDLNEIAKERNLSRQTIENHLIRCYEDGMEVEWQS
FVPSEYESLIETAVQNAEGGLKSIKEQLPNEVSYFMIRAYLQIRK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgtttactaaagcacaagaacttttagcgtcctactttggttattcttcgtttcgaaga
ggacaagatgaaacaattaaaaatgtactagatgggaaagatacagtttgtattatgcca
acaggtggcggtaagtcgatttgttatcaaattccggcattagtatttgaaggaacgacg
ttggttatatcccctttaatatcacttatgaaggatcaagtagatacattggtacagaat
ggcatttcagctacatatattaatagttctatttctattgctgaagcaaatcagcgaatt
caattagcgaaacaaggacattacaagttactttatgtggcgcctgagcgtcttgattcg
atggagtttgttgaccaacttatcgatatgaaaatccctatgattgcgattgatgaagca
cactgtatttcacagtggggacatgatttccgtccaagttatttacatatacatcgcatt
ttagattatcttccagaaaaaccgctcgtattagcattaacagcaacagcaacaccgcaa
gtacgtgaagatatttgtaacacacttgaaattaatcaagaaaatacaattatgacaacg
tttgagcgagagaacttatcgttttctgtcattaaaggacaagatcgaaatgcatatttg
gcggattatattcgtcaaaatcaaaaggaatctgggattatatatgcagctactagaaaa
gtagtcgatcagttatatgaagatttaatgaaggcaggagtttctgtatcaaaatatcat
gctggtatgagtgatagtgatcgaaatgagcaacaagaactctttttacgagatgaagta
agtgtaatggtagcaacatctgcattcgggatgggtattgataaatcgaatattcgttac
gtaattcattatcagcttccaaaaaatatggaaagttactatcaagaagcgggacgtgct
ggtcgtgatggattagatagtacatgtatattgttatattcttctcaagatgtacaagta
cagcggtttttaattgatcaatcaactggagaatcacgtttttcaaatgaacttgaaaaa
ttgcaaaatatgaccgattactgtcatactgaacaatgtttacaatcattcattttgcaa
tactttggagaagaaccgaaagaagattgtggacgctgtggtaattgtacagacaatcgc
gagagcatcgatgtgacaagggaatcacaaatggttttatcatgcatgattagaacgaac
caacgctttggaaagcaaatgatagcgcaagtattaacggggtcgaaaaataagaaagtt
attgaatttaatttccatactttaccaacgtatgggcttttatcgaaccgtagtgtaaaa
gaggtcagtgagtttattgagtttttaatttcagatgagttaattgcagttgaacatggc
acttatccgacgttaaaagtaacagaaaaagggaaagaagtattacttggtaaagagaat
gttttacgaaaagaacgagtagagacaagacaaattgttcaagaccatcctttatttgaa
gtgcttcgtgaagtacgtaaagaaattgcacaaggagaaggtgtacctccgttcgttatt
ttctctgaccaaacattgaaagatatgtgcgtgaaaatgccgcaaagtgattccgaattg
ttgacggtaaaaggtatcggagaacacaaacttgtgaaatatggctcgcacttcttacaa
gcagttcagcattttattgaagaaaatccaaattatgctgaaacgattaagacagaagta
gtttcagagcgtaaaaagtcaggaaaagcgtccgcaaattctcatttagaaacgtatgaa
atgtataaacaaggtattgatttgaatgagattgcaaaagaacgcaacttatcaagacaa
acaatcgaaaaccatttaattcgctgctacgaggatggaatggaagtagagtggcaaagt
tttgttccatcagagtatgaatctcttattgaaactgccgttcaaaatgcagagggtggt
ctgaaatctattaaagaacagcttccgaatgaagtgagttactttatgattcgtgcttat
ttacaaataagaaagtag
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