Bacillus thuringiensis serovar konkukian 97-27: BT9727_0090
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Entry
BT9727_0090 CDS
T00179
Symbol
spo0H
Name
(GenBank) RNA polymerase sigma-30 factor
KO
K27000
RNA polymerase sigma-H factor
Organism
btk
Bacillus thuringiensis serovar konkukian 97-27
Brite
KEGG Orthology (KO) [BR:
btk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btk03021
]
BT9727_0090 (spo0H)
Transcription machinery [BR:
btk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BT9727_0090 (spo0H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
HTH_23
HTH_28
HTH_16
HTH_38
Sigma70_r4
Lebercilin
ACDC
HTH_30
COG5_N
HTH_Tnp_Tc3_1
Relaxase_C
UPF0122
HTH_29
DUF1676
Motif
Other DBs
NCBI-ProteinID:
AAT58913
UniProt:
Q6HPS4
LinkDB
All DBs
Position
108718..109374
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AA seq
218 aa
AA seq
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MEAGFVSVGDVTFRDLEDEAIVELVRKGNTDALEYLIHKYKNFVRAKSRSYFLVGADRED
IVQEGMIGLFKAIRDYKEDKLSSFKAFAELCITRQIITAIKTATRQKHIPLNSYVSLDKP
IYDEESDRTLLDVISEAKVTDPEEMIISQEEYTDIESKISELLSDLERKVLSLYLDGRSY
QEISEQLNRHVKSIDNALQRVKRKLERYMEMRESTTSN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcaggcttcgtaagtgtaggcgacgttacatttcgtgatttagaagatgaggca
atcgttgagttagttcgaaaaggtaatactgacgctctagaatatttgattcacaaatat
aagaactttgttcgcgcgaaatcgagatcttatttcttagtgggtgccgatcgagaagat
attgttcaagaaggtatgattggattgtttaaagcgattcgtgattataaagaggacaag
ctgtcttcattcaaagcatttgctgaactgtgtatcactcgacaaattattaccgctatt
aaaacagcaaccaggcaaaagcatattccgttaaattcgtatgtgtctttagataaaccg
atttatgacgaggaatctgatcggacattattagatgttatttcggaagcgaaggtaact
gatcctgaagaaatgattataagtcaggaagaatataccgacatagaatctaagatatct
gaattattaagcgatttagaaaggaaagtgctttctttatatctagacggtcgttcttat
caagagatttcggaacagttaaatagacatgtaaaatctattgataacgctttacagaga
gtgaagcggaaattggaacgatatatggaaatgagagagagtaccacttcaaattaa
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