Bacillus thuringiensis HD-789: BTF1_26540
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Entry
BTF1_26540 CDS
T02411
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
btn
Bacillus thuringiensis HD-789
Pathway
btn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
btn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BTF1_26540 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btn03021
]
BTF1_26540 (rpoB)
03400 DNA repair and recombination proteins [BR:
btn03400
]
BTF1_26540 (rpoB)
Enzymes [BR:
btn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BTF1_26540 (rpoB)
Transcription machinery [BR:
btn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BTF1_26540 (rpoB)
DNA repair and recombination proteins [BR:
btn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BTF1_26540 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AFQ29470
UniProt:
A0A9W3P6H2
LinkDB
All DBs
Position
5151053..5154586
Genome browser
AA seq
1177 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYSVDECKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEITELLGDNEYLSNTLEKDNTDSTEKALLEIYERL
RPGEPPTVENAKSLLVSRFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVDPETG
EILAAEGTILDRRTLDRILPYLEKNIGFKTAKPMGGVVEGDVELQSIKIYAPESEGERVI
NVIGNANITRDVKHITPGDILASISYFFNLLYKVGDTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSIQDTNAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSFAKVNEFG
FIETPYRRVDPETGLVTGHVDYLTADEEDNYVVAQANMKLSDEGEFLSEDIVARFRGENI
VTNRERIDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLMNPESPIVGTG
MEYVSAKDSGAAVICKHPGVVERVEAREVWVRRYVEVDGQTVKGDLDRYKMQKFIRSNQG
TCYNQRPIVSVGNEVVKGEILADGPSMELGELALGRNVLVGFMTWDGYNYEDAIIMSERL
VKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDGDL
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIILDVKVFNREDGDEL
PPGVNQLVRAYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNPLG
VPSRMNIGQVLELHLGMAARYLGIHIATPVFDGAREEDVWGTIEEAGMANDAKTILYDGR
TGEPFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGMD
VKMMSSDDTEIEMRDTEDDDDHQSADKLNVEVETTKE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatacggacgccaccgccaacgaagaagttatgcccgtatt
agtgaagtattagagttaccaaatcttatcgaaattcaaacctcttcttatcagtggttt
cttgatgagggtttgcgagaaatgttccaagacatttctccgattgaagactttacggga
aatctatcgcttgaatttatcgactacagcttaggtgaacctaaatactctgtagacgaa
tgcaaagagcgtgatgtgacgtatgcagcaccacttcgtgtaaaagtgcgtctaatcaac
aaggaaactggtgaagtaaaagaacaagatgtgttcatgggagatttcccactcatgaca
gagactggaacattcgtaattaacggtgcagaacgtgttatcgtttcccagttagttcgc
tctccaagcgtatactatagtggcaaagtggataaaaacggaaaacgtggttttactgct
actgtaattccaaaccgcggagcttggttagagtatgagacagatgctaaggatgttgta
tatgtgcgtattgaccgtacgcgtaaacttcctgtaactgttttgttacgcgcattaggg
tttggctctgatcaagaaatcaccgagcttttaggtgataacgaatacttaagcaacaca
ttagaaaaagacaacacagatagcacagaaaaagcattgcttgaaatttatgagcgtcta
cgtcctggtgaaccaccaacagtagaaaatgctaagagcttacttgtgtctcgtttcttc
gatccaaagcgctacgatttagcaaatgtaggtcgctataagatcaacaagaagttacac
attaaaaacagattgtttaatcaacgtttagctgaaacattagtggatccagaaactggt
gaaattttagcggcagaaggaacaatcttagatcgtcgtacacttgatcgcattttacct
tacttagagaaaaacattggattcaaaacagcgaaaccaatgggtggagtggtagaaggc
gatgttgagctgcaatctattaagatttatgctcctgagtcggaaggcgaacgcgtaatt
aatgtaattggtaatgcaaacattactcgtgatgtgaaacacatcacaccaggtgatatc
cttgcttctatcagttacttcttcaacctactatacaaagtaggagatacagatgatatt
gaccatttaggaaaccgtcgtctgcgttctgttggagaactattacaaaaccaattccgt
atcggcctttctcgtatggaacgtgttgttcgtgagagaatgtcgatccaagatacaaat
gcaattacaccacaggcattaattaatattcgtcctgttattgcatctattaaagagttc
ttcggaagttctcagttatctcagttcatggaccaaacaaatccattagcagagttaact
cacaaacgaagactatctgcattaggacctggtggtttaacgcgtgagcgcgcaggcttt
gaagtacgtgacgttcattactcccactatggtcgtatgtgtccgattgaaacaccagag
ggaccaaacattggtttgattaactcattatcttcgttcgcgaaagtaaatgagtttggt
ttcattgaaacaccataccgtcgtgttgacccagaaactggtcttgtaacagggcatgtt
gattatttaacagcagatgaagaagataactatgttgtagcccaagcgaatatgaaatta
tctgatgaaggtgaattcctaagtgaagatatcgtagctcgtttccgtggcgaaaatatt
gtcacaaatagagaacgcatcgactacatggatgtatctccaaaacaagtagtgtcggca
gcgacagcttgtattccgttcttagaaaacgatgactctaaccgcgcacttatgggagcg
aacatgcaacgtcaggcggttccgttaatgaatccggaatctccgattgtaggtacaggt
atggagtacgtatcagcaaaagactcgggtgctgcagtaatctgtaaacatcctggtgtt
gttgagcgcgtagaagcacgtgaagtttgggtacgtcgctatgtagaagttgacggtcaa
acagtaaaaggcgacttagatcgctacaaaatgcaaaaattcattcgttctaaccaagga
acttgttacaaccaacgtccaatcgtaagtgttggaaatgaagttgtaaaaggtgaaatc
cttgcggatggtccttctatggaattaggtgaactagcacttggacgtaacgtgcttgtt
ggcttcatgacttgggacggttataactacgaggatgcgattatcatgagtgagcgcctt
gtaaaagatgatgtgtacacttctattcatattgaagaatatgaatcagaagctcgtgat
acgaagcttggaccagaagaaattacacgtgacattccaaacgttggggaagacgcatta
cgtaaccttgacgagcgcggtatcattcgcgttggtgctgaagtaaaagatggagattta
cttgttggtaaagtaacacctaaaggtgtaacagaattaacagctgaagaacgtctatta
catgctatctttggagaaaaagcgcgtgaagtacgtgatacatcactacgtgtaccacac
ggtggtggcggtattatcttagacgtaaaagtattcaaccgtgaagatggcgatgaattg
ccaccaggtgtgaatcaacttgtacgtgcatatatcgttcaaaaacgtaaaatttctgaa
ggtgacaagatggccggacgtcacggtaacaaaggtgttatttctcgtattttaccagaa
gaagatatgccttacttaccagacggtacgccaatcgatattatgttaaacccattaggg
gtaccatctcgtatgaatatcggtcaggtattagagcttcatcttggtatggcagcaaga
tacctgggcattcacattgcaacaccagtattcgatggtgctcgtgaggaagatgtttgg
ggcacaattgaagaagctggtatggcaaatgacgcgaaaacaatcctgtatgacggacgt
actggtgaaccattcgataaccgcgtatctgttggtgtcatgtatatgatcaaacttgcg
cacatggttgacgataaacttcatgctcgttctactggaccatactcacttgtaacgcag
caacctcttggaggtaaagctcagttcggtggacagcgtttcggtgagatggaggtttgg
gcacttgaagcttacggtgctgcttatactcttcaagaaatcttaacagtgaagtctgat
gatgttgttggacgtgttaagacttatgaagcaattgttaaaggcgaaaatgttccagaa
ccaggcgttcctgaatcattcaaagtattgattaaagagctgcaaagtttaggtatggac
gttaaaatgatgtctagcgacgatacagaaattgaaatgcgtgatacagaagatgatgat
gatcatcaatcagcagataaattgaatgttgaagttgagacaactaaggaataa
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integrated database retrieval system
