Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_16260
Help
Entry
WQG_16260 CDS
T02504
Name
(GenBank) Alpha-hemolysin translocation ATP-binding protein HlyB
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
bto
Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto02010
ABC transporters
bto03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
bto00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
WQG_16260
03070 Bacterial secretion system
WQG_16260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bto02000
]
WQG_16260
02044 Secretion system [BR:
bto02044
]
WQG_16260
Transporters [BR:
bto02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
WQG_16260
Secretion system [BR:
bto02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
WQG_16260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_21
AAA_29
AAA_16
AAA_22
AAA_18
nSTAND3
DUF87
MeaB
RsgA_GTPase
PRK
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AGH38903
LinkDB
All DBs
Position
complement(1787167..1789329)
Genome browser
AA seq
720 aa
AA seq
DB search
MELPFYFIKGDNMEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWL
LAAKSLVLKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQ
ILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLIVSIFLQIF
ALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFSHSTSRIDVEL
GAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMW
YYSPKLTLVILGSLPFYILWSIFISPILRRRLDDKFARSADNQAFLVESVTAINMIKAMA
VAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDLSI
GQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTEQYQGKLSLPEIKGD
ISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVL
IDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDF
ISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHIIMQN
MQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYSYLHQLQLN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggagttgccgttttattttataaaaggagacaatatggaagctaaccatcaaaggaat
gatcttggtttagttgccctcactatgttggcacaataccataatatttcgcttaatccg
gaagaaataaaacataaatttgatcttgacggaaaagggctttctttaacctcttggctt
ttagccgcaaaatcgttagtgttgaaagcgaaacacattaaaaaagagatttctcgctta
cacttggtgaatttacctgcattagtttggcaagataacggtaaacattttttattggta
aaagtggataccgataataaccgctatttaacttacaatttggaacaagatgccccacaa
attctgtcacaagacgaatttgaagcctgctatcaagggcaattaattttggtcacatct
agagcttccgtagtaggtcaactagcaaagttcgatttcacctggtttattccggcagtg
atcaaataccgaaaaatctttctagaaaccttgattgtttcgatctttttgcaaattttt
gccctaattacaccgctatttttccaagttgttatggataaagtactggtgcatcgaggt
ttttcaaccttgaatatcattacggttgccttagctattgtgatcatctttgaaattgta
ctaagtggtttgagaacctatgttttttctcatagcactagccgtattgatgttgaatta
ggcgctaaattatttcgacatttattatcactacccatttcttattttgaaaacagacga
gttggagatacagtcgctagggttagagaattagatcaaattcgaaattttctcacaggg
caagcattaacttctgttctagatttattattctcttttatcttctttgccgtgatgtgg
tattacagtccgaagttgactcttgttattcttggctcattacctttctatatattgtgg
tctatttttatcagtccaattttgcgacgacgtctagatgataaatttgcccgaagtgct
gataaccaagcattcttagttgagtcggtaacagccatcaatatgattaaagcgatggcg
gttgctccacaaatgactgatacatgggataaacagctggcaagctatgtttcatcaagt
ttccgtgtcaccgtattagcaaccattgggcaacaaggtgtacaacttattcaaaaaacc
gttatggtgattaacctttggttaggggcacacttagttatttcaggcgatcttagtatt
ggacaattaattgcctttaatatgctgtcaggacaagtgattgcaccggtgattcggtta
gctcagctctggcaagatttccaacaagttgggatttccgtcactcgcttaggtgatgtt
ttaaactctccaacagagcaatatcaaggaaagttatcactaccagaaataaaaggcgat
atctcatttaaaaatatccgctttagatataaaccagatgcaccaactattttaaataat
gtgaatttagaaattaggcaaggagaagtgattgggattgttggacgttccggttcaggc
aaaagtactctgactaaattactgcaacgtttttatattcctgaaaatgggcaggttttg
attgatggacatgatctagccttagctgatccaaactggctacgccgtcaaataggtgta
gtgctgcaagataatgtgttattaaaccgcagtatccgagaaaatattgcgctatcagat
ccaggaatgccaatggagcgagtaatttatgcagcaaaattagcaggggctcacgatttt
atttcagaattgcgtgaaggttataacaccattgtgggtgaacaaggagcggggctttca
ggcgggcaacgccaacggattgcgattgcacgagccttggtaaataacccgaaaatcctg
atttttgatgaggcaaccagtgccctcgattacgagtctgagcatattattatgcaaaat
atgcaaaaaatatgccaaggtcgaactgtgattttaatagctcatcgcttatctacagta
aaaaatgctgatcggattattgtgatggaaaaaggggaaatagtagaacaaggcaaacat
cacgaattactacaaaacagtaatgggctttattcttacttacaccaattacaactaaat
taa
DBGET
integrated database retrieval system
