Bibersteinia trehalosi USDA-ARS-USMARC-192: WQG_21590
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Entry
WQG_21590 CDS
T02504
Name
(GenBank) Catabolite gene activator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
bto
Bibersteinia trehalosi USDA-ARS-USMARC-192
Pathway
bto02020
Two-component system
bto02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bto00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
WQG_21590
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WQG_21590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bto03000
]
WQG_21590
Transcription factors [BR:
bto03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
WQG_21590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Crp
HTH_23
HTH_11
MarR
HTH_29
HTH_28
MarR_2
GntR
HTH_24
RPA_C
TrmB
RepL
Sigma70_r4
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AGH39436
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Position
2304252..2304758
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AA seq
168 aa
AA seq
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MKGAVSVFVKDDDGKEMLLTNLGQGEFVGELLLFEEKAQQRTAWVRTKCDCEIAEISYKK
FKQLVHLNPDILMYLSAQMARRLRMTSRQVSNLAFLDVTGRIAQTLLNLAKLPDAMTHPQ
GMQIKITRQEIGQMVGCSRETVGRVLKLLEDEGLISAHGKTIVVYGTR
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaggtgccgtttccgtttttgtaaaagatgatgacggcaaagaaatgctactgaca
aacttaggacaaggcgagtttgtgggtgagctactcttgtttgaagaaaaagctcaacaa
cgcaccgcttgggtacgcactaaatgtgattgcgaaattgctgaaatttcttataaaaaa
ttcaaacagctggtgcatttaaatccagatattttgatgtatctctctgctcaaatggca
cggcgcttacgtatgacttctcgccaagtgagcaatttagccttccttgatgttacgggt
agaattgcacaaacgctactgaatttagcgaaattgcctgatgcaatgacacatccacaa
ggaatgcaaattaaaattacccgacaagaaattggacaaatggtaggatgctcacgcgaa
acggttggtcgagtgttgaagctattagaagacgaaggcttaatttctgctcatggtaaa
actattgtagtgtatggcacacgttaa
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