Kyrpidia tusciae: Btus_2145
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Entry
Btus_2145 CDS
T01220
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
bts
Kyrpidia tusciae
Pathway
bts02020
Two-component system
bts02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bts00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Btus_2145
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Btus_2145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bts03021
]
Btus_2145
Transcription machinery [BR:
bts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Btus_2145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_6
HTH_23
HTH_3
HTH_IclR
HTH_Crp_2
HTH_31
HTH_21
HTH_Tnp_ISL3
HTH_38
Sigma70_r4
HTH_26
LacI
Phage_CII
HTH_12
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ADG06823
UniProt:
D5WR93
LinkDB
All DBs
Position
complement(2148264..2149619)
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AA seq
451 aa
AA seq
DB search
MQMGFGLWQQQTQKLILTQELRQAIAILQLSSFELSQYLQQEMAENPVMEWEEAAGAEGW
GEFDAWLRESGPDPGLLRSMRESYREPPADVAARAENLEDHLMVQLSDLRLSPLEKRVLR
YIIGNIDERGYVSMSSAEMAAQLGVEEMLVERCRRRLHGLEPLGIGALDLRECLNIQARE
RYPDEPGLKDLIDHHLQDVAEGRQSRIAQALQVDLQEVQRLSDLLKTLDPKPGRMFFGDQ
VRFVIPDVTIERVGGDYVVVVHDRLTPHLHINPIYRRIASTQGADREAKSYLSKKIQSAM
WLIRSLEQRRQTILRVTEAIVELQRDFFDRGLEYLRPMTLRQVAERVGVHESTVSRATTG
KYAQTPRGVLELKYFFSSGVQTRGGEGASAESIKAKIRKWIQEEDRSDPLSDQRLADLLQ
QEGIRISRRTVAKYREELRIASSAQRRRYGS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcagatggggttcggactgtggcagcaacaaacgcaaaagttgatccttactcaagag
ttgcgccaagcgattgcaattctgcaattgtcttccttcgagttatcgcaatacttacaa
caagagatggccgagaatccggtgatggaatgggaagaggcggccggggccgaaggatgg
ggcgaatttgacgcctggttgcgggaatccggcccagatccgggactgctgcgctcgatg
cgcgaatcgtaccgggagcctccggcggacgtggcggccagagccgagaatctcgaagac
catttgatggttcagttgtccgatctccgactgagccccttggaaaaacgggtgctgcgt
tacatcatcgggaatatcgacgaacgcggctatgtgtccatgtccagcgccgagatggcc
gcacaactcggggtggaggaaatgttggtggagcggtgccgccgccggttgcacggcctg
gaacccttggggatcggggcgctggacctgcgggaatgtctcaacattcaggcccgggag
cgttatcccgacgaacccggtctgaaggatctgatcgatcatcatcttcaggatgtggcc
gaggggcgtcagtcgcgaatcgcccaggctttgcaggtcgacctgcaagaagtacagcgt
ctgtccgacctgctgaaaaccttggacccgaaacccgggaggatgttttttggggatcag
gtccggtttgtgattccggatgtgaccattgagcgggtgggcggggactatgtggtggtg
gtacacgatcggctcacgccgcatttgcatattaaccccatctatcgccggatcgcctcg
acccaaggggcggaccgggaggcgaaatcttatctgtcgaaaaaaattcaatcggccatg
tggttgatccgcagtttggagcagcgaagacagacgattctgcgggtgaccgaagccatt
gtggagctgcagagggacttttttgaccggggcttggagtacttgcgcccgatgactctg
cgccaagtggccgagcgggtcggagtgcacgaatccaccgtcagccgggccaccacgggc
aaatacgcccagacgccccggggagtattggagttaaaatatttcttcagctcaggggtt
cagacccgaggcggagaaggggcatcggcggagagcatcaaagcgaagattcgcaaatgg
atccaggaggaggatcgttcagaccctctgagcgaccagcgcctggccgaccttttgcag
caagagggcattcggatctcccgccgaaccgtggctaaataccgcgaggaactccgcatt
gcctcgtcagcccagcgccggcgctatggttcctga
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