Borrelia turicatae: BT0230
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Entry
BT0230 CDS
T00737
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
btu
Borrelia turicatae
Pathway
btu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BT0230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btu03021
]
BT0230
03019 Messenger RNA biogenesis [BR:
btu03019
]
BT0230
Transcription machinery [BR:
btu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BT0230
Messenger RNA biogenesis [BR:
btu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BT0230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
Spore_III_AA
AAA_22
AAA_25
AAA_24
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AAX17565
UniProt:
A1QZ23
LinkDB
All DBs
Position
complement(234181..235725)
Genome browser
AA seq
514 aa
AA seq
DB search
MDKKCAEFDLEDEMKRLNSSKELKIEDNSKKKIVKVVTKKESVASGLKNSNIDKLRESNG
VSSGFDYDISDPDLENSIKTLEQSNIINFLGGKDFIVIDSLYDKPITEIRKVVEGLGTNH
TIAVTMKKTELIFLLVKILTEHNINVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVSP
SQIRLFNLRTGDILYGQIRSPRDGERFFAMIKIKSINDQDPTFAQNRIPFDNLTPLYPSS
KLDLEYENCNISTRLINLFSPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYPDIVLMI
LLIDERPEEVTDMIRGVKGEVIASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLDS
ITRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGSK
MDEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLSEEERSKILLIRKI
LGGVDDYEGVEALVEKMKKSKNNEIFLKTMSNGD
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatgtgcggaatttgatttagaggatgaaatgaagcgtttaaattcttct
aaagaattaaagattgaggataattctaagaaaaaaatagttaaagttgtcactaaaaaa
gaatctgttgctagtggacttaaaaactctaatattgataaattgagagaatctaatgga
gtctcgtcaggttttgattatgatatatctgatccagatttagaaaatagtattaagact
cttgagcaaagcaacattattaattttttaggtggtaaagattttatcgttattgatagt
ctttatgataagcccattaccgaaatcaggaaagttgttgagggtcttgggactaatcat
actattgcggtaacaatgaagaagacagaattaatatttttacttgttaagatattaact
gaacataatattaatgttttatttactggcgttcttgatgttttaagtgatgggtacggg
tttttgcgtacagcatctaattcttatctttcaggaggtaatgatgtttatgtttcaccg
tctcagattagactttttaatttaaggacaggtgatattttatatgggcagattaggtct
ccaagggatggtgagagattttttgcaatgattaaaattaaaagcattaatgaccaggac
cctacatttgcacaaaatagaataccttttgataatttaacacctttatatcctagttca
aagttggatcttgaatatgaaaattgtaatatttccactaggcttattaatcttttttct
cctattggaaaaggacaaagagcattaatagtatcacctccaaaggctgggaagactact
ttgcttcaaaaaatagcaaatgcaattactactaattatccagacattgttttaatgatt
ttacttattgatgagagacctgaagaagtgactgacatgattcggggtgttaagggtgag
gtcattgcatctaattttgatgagcaggctagtagacacgtgcaggttgcagagatggtt
attgagaaggcaaaaagacttgttgagaataaaaaggatgttgttattcttttagattct
attacaagacttgcaagggcttataatcagactatgccaacttctggtaagatactctca
ggtggagttgattctaatgctttacataaaccaaaaagattttttggttctgctagaaat
attgaggaaggtggaagtcttactattatagctacagctttagttgatactggaagtaag
atggatgaagttatatttgaggaatttaaaagtactggtaatatggagttaattcttgat
aggagtttggcagatagaaggctttttcctgctattaatattaagaaatcagggacaaga
aaagaagaattgcttttaagtgaagaggagcgttctaaaattttgcttattagaaaaatt
ttaggtggtgttgatgattatgaaggtgttgaagctttagttgaaaagatgaaaaagagt
aagaacaatgaaattttcctaaagaccatgagtaatggggattag
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