Borrelia turcica: DB313_01175
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Entry
DB313_01175 CDS
T05670
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
btur
Borrelia turcica
Pathway
btur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
btur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DB313_01175 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
btur03021
]
DB313_01175 (rho)
03019 Messenger RNA biogenesis [BR:
btur03019
]
DB313_01175 (rho)
Transcription machinery [BR:
btur03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DB313_01175 (rho)
Messenger RNA biogenesis [BR:
btur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DB313_01175 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA
Spore_III_AA
NACHT
AAA_22
AAA_25
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AYE36117
UniProt:
A0A386PMP2
LinkDB
All DBs
Position
complement(241190..242731)
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AA seq
513 aa
AA seq
DB search
MDKKFEEFDLEDEMKRLNSSKELKIEDNSKKKIVKVVAKKEASSLSKKSDDERLRVVNGV
SSDFDYDISNPDLENSIKTLEQSNIVNFLGGKDSITINTLYDKPITEVRKVVEGLGTNHT
IAVTMKKTELIFLLVKILTEHNISVLFTGVLDVLSDGYGFLRTASNSYLSGGNDVYVSPS
QIRLFNLRTGDILYGQIRSPRDGERFFAMIKIKSINDQDPTFAQNRIPFDNLTPLYPSSK
LDLEYENCNISTRLINLFAPIGKGQRALIVSPPKAGKTTLLQKIANAITTNYPDIILMIL
LIDERPEEVTDMIRGVRGEVVASNFDEQASRHVQVAEMVIEKAKRLVENKKDVVILLDSI
TRLARAYNQTMPTSGKILSGGVDSNALHKPKRFFGSARNIEEGGSLTIIATALVDTGSRM
DEVIFEEFKSTGNMELILDRSLADRRLFPAINIKKSGTRKEELLLNEEERSKILLIRKIL
GGVDDYEGVEALVEKMKKSKNNEIFLKTMSNGD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatttgaggaatttgatttagaggatgaaatgaaacgtttaaattcttct
aaagagctaaaaattgaagataattcaaagaaaaagatagttaaagttgtggctaagaaa
gaagcttctagtttatctaaaaaatctgatgatgagcgattgagggtagttaatggagtt
tcttcagattttgattatgatatatctaatccggacttagaaaacagtattaaaactctt
gaacagagtaacattgttaattttttaggcggcaaggatagcataactataaacactctt
tatgataagcccattactgaggttaggaaagttgttgaaggccttggaactaaccatact
attgcagtaacgatgaaaaagacagagttaatatttttacttgttaagatattaacagaa
cataatattagtgttttatttactggggttcttgatgttttaagtgatggatatggattt
ttgcgtacagcatctaattcttatctttcaggaggtaatgatgtttatgtttcaccgtct
cagattaggctttttaatttaaggacaggtgatattttatatgggcagattaggtctcca
agggatggcgagagattttttgccatgattaagattaagagtattaatgaccaagatcct
acgtttgcacaaaatagaataccttttgataatttaacacctttatatcctagttcaaag
ttagatcttgaatatgaaaattgtaatatttctacaaggcttattaatctttttgcacct
attggaaagggacagagagctttaatagtgtcgcccccaaaggctggaaaaactactttg
cttcaaaaaattgctaatgcaataactactaattatccagacattattttgatgatttta
cttattgacgagagaccagaagaggtcactgacatgattcgtggtgttagaggtgaagtg
gttgcatctaattttgatgagcaagctagcaggcatgtacaggttgcggagatggtaatt
gagaaggcaaaaaggcttgttgagaataaaaaggatgttgttattcttttggattctatt
acaaggcttgcaagagcttacaatcagactatgccaacttccggtaaaatactttctggc
ggtgttgattctaatgctttgcataagccaaaaagattttttggttctgctagaaatatt
gaagaagggggcagtcttaccattattgctaccgctttagttgatactggaagtagaatg
gatgaggttatttttgaagagtttaagagcactgggaatatggaactaatccttgatagg
agtttggcagacagaagacttttccctgctattaatattaagaaatcaggcacaagaaaa
gaagaattgcttttgaatgaggaggagcgttctaaaattttacttattagaaagatttta
ggtggtgttgatgattatgaaggtgttgaggctttggttgaaaagatgaaaaaaagtaaa
aataatgaaattttcctaaagactatgagtaatggggattaa
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