Burkholderia sp. CCGE1001: BC1001_1417
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Entry
BC1001_1417 CDS
T01424
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
bug
Burkholderia sp. CCGE1001
Brite
KEGG Orthology (KO) [BR:
bug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bug03021
]
BC1001_1417
Transcription machinery [BR:
bug03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BC1001_1417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
HTH_30
Sigma70_ECF
DUF5753
HTH_24
HTH_5
DUF134
REC114-like
Motif
Other DBs
NCBI-ProteinID:
ADX54853
LinkDB
All DBs
Position
1:1618273..1618824
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AA seq
183 aa
AA seq
DB search
MSFEAEVIAWLPQLRRYARALTGDRAWADDLVQDTAERALARWKAFRPNSNLRAWLLTIL
RHLYIDQLRGRREIAVDEESAPWRNLEAPPREVDGLVLRDLQRALYCLPLEQREVLLLVC
VEELTYQETSKALGVPVGTVMSRLSRAREHLRVLLEGPAEGTGEGARQGPARKPPLKVVR
NPR
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgagcttcgaagccgaagtgattgcgtggctcccgcagctgcgccgctatgcgcgggcg
ctgacgggtgaccgcgcgtgggccgacgacctcgtgcaggacacggcggagcgcgcgctc
gcgcgctggaaggcgttccggccgaacagcaatctgcgcgcgtggctgctcaccatcctg
cggcatctgtatatcgatcaattgcgcggccgccgcgagattgccgtcgacgaagaaagc
gccccctggcgcaatctcgaggcgccgccacgcgaggtcgacgggctcgtgctgcgcgat
ctgcagcgcgcgctatattgtttgccgctcgagcagcgtgaggtgctgctgctcgtctgc
gtggaggaactgacgtatcaggagacgtcgaaagcgctcggcgtgccggtgggcacggtg
atgtcgcgtctgtcgcgcgcgcgcgagcatctgcgcgtgttgctggaagggcccgccgag
gggaccggcgaaggggcgaggcaagggccggcgcgcaagccgccgctgaaagtagtgaga
aatccgcgatga
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