Burkholderia sp. PAMC 28687: AX768_04880
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Entry
AX768_04880 CDS
T05699
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bui
Burkholderia sp. PAMC 28687
Pathway
bui03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bui00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AX768_04880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bui03400
]
AX768_04880
Enzymes [BR:
bui01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AX768_04880
DNA repair and recombination proteins [BR:
bui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AX768_04880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMM13531
LinkDB
All DBs
Position
1:1054175..1057561
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AA seq
1128 aa
AA seq
DB search
MLELFYSNRHETLSQALLDDVAAFALNDGDPFASQTIIVPSAAVRRRLELDMAARFGICA
NVDLCYLAQWLWARIGGVLQVPEHSPFAPDRLVWRCFRLLGAMEDTAPEGSSRLHAYLDA
ADDSMRYELARRIATVFDHYLTYRPEWLQHWQAGGSIMASTGGAIDANGPRLPGASAIQR
EDERWQADLWRALLADLALDTDARDPTPPAYKFLTESPKLDLDAVMKAEWPERVSVFALP
TMPPLHIALLRELSRWIDVRIYAINPCREFWFDIVSEARVEQLELAGKLDFQEVGHPLLA
EWGRQTQAQLHMLHELTESAASREASHFEHNAAPSWLAHVQNAILDLDAPSGAEEALSLE
PGIEIHVCHSLSRQLEVLHDRLLGWFDEVDGLQPSDVLVAFPDLAAAGPLIDGVFGTAPP
GVAGERRRIPYRITGLPPSQANPVARVLLDWLALPERSVGAPELIEWLRVDAVAARYGID
AVALETAQTWLAAAGARRGLAPSAVTGVDVPAARHTFSDALTRLFLGYALPDGGAPVDEW
LPVEGAHGSDSELLGRLTRFIDDIDAFGERVATPRPPAAWTQTLLAALTQFFDAGLPFAD
SIADVRATLDSLMLSMNEGAAESEISADVLRTALTDALDDAARGGVPWGGVTFSSLTSLR
GLPYRVICLLGMDDGMLPSLARADEFDLMASFGKLGDRQRRDDERNLFLDLLLAARDRLM
IAYTGRSIRDNAALPPAALIDELLDHLAVTVAGDDASPKELEAARSRFVFEHPLQPFAPE
YFSNPLFTYEPERAELARTLALGKTEPSVRFFGVPLPAEDVEPIAFDDFERFWRHPARAI
LRDRLGIALFDAESELGDTEPFELEYPGRAALADRVLPSLLELTVENETRALDRARRVAR
ASPEMPGGATGGVWQSREIGALHSLANRVRIATEVGASRLPFALDIAPRWPDAELFGRYD
ATLQADALQPMQIHGTLNLLTDEGQIIYRYDVPRARDYLSAWLAHLAYCAALPDGPRRTV
WHGRGAQSSGFELTPVADPLAHLATLAALYRAGRRLPLRFFPKSAWTWVTESESKAQGVW
VSDRTRGESDDPALRIAFRGSDLRLDETFATLARLVFEPLKQHLRSDA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacttttctattcgaaccgccatgaaacgctgtcgcaggcgctgctggacgac
gttgccgcgttcgcgctcaatgatggtgacccctttgcaagccagaccatcatcgtgccg
agcgcggcggtgcgaaggcggctggaactcgacatggcagcgcgcttcggaatctgcgcc
aacgtggacctgtgttatctcgcgcaatggttgtgggcgcgcattggcggcgtgttgcag
gtgcccgagcattctccttttgcgccggaccggctggtgtggcggtgctttcgtctgctc
ggcgcaatggaggacacggcgcccgagggttcgtcgcggcttcacgcgtatctggatgca
gccgacgattccatgcgctacgaactcgcgcgccgtattgcgacggtgttcgatcactat
ctgacataccgcccggaatggctgcagcactggcaggcgggcggctcgatcatggcgtcc
accggcggcgcgatcgatgccaacggtccacgcctgcccggcgcgagcgccatccagcgc
gaagacgaacgctggcaggccgatctgtggcgcgcactgctcgccgatcttgcgctcgat
accgacgcgcgtgaccccacgccgcctgcgtacaagttcctgaccgaatcgccgaagctg
gatctcgatgccgtgatgaaggcggagtggcccgagcgcgtcagcgtgttcgcgttgccg
accatgccgccgctgcatattgcgttgctgcgtgaactgtcgcgctggatcgacgtccgt
atttacgccatcaatccgtgccgggaattctggttcgatattgtcagcgaggcacgggtt
gaacaactcgaactcgcaggcaagctggacttccaggaggtggggcatccgctgcttgcc
gaatggggccgccagacgcaggcacagttgcatatgctgcatgagttgaccgagagtgca
gcatcgcgggaagccagtcatttcgagcacaacgccgcgccgagctggctcgcgcacgtg
cagaacgccatcctcgacctggacgcgccgtccggagcggaggaggcactctctctcgaa
cccgggatcgagattcatgtttgccatagtctgtcgcgccagcttgaagtgctgcacgac
cgcctgctcggctggttcgacgaggtcgacggactgcagccgtccgacgtactcgtggcg
tttccggatctggccgcagccggtccgctgatcgacggcgtgttcggcactgcgccgccc
ggcgtggccggggagcgtcggcgcattccgtatcggatcacgggtctgccgccatcgcag
gcgaatcctgtcgcgcgtgtgctgcttgactggctggcgctgcccgagcgcagcgtgggt
gcacccgaactgatcgaatggctgcgggtcgatgcggtcgcggcgcgttatggcatcgat
gccgtcgcgctcgaaaccgcgcagacatggctggcggcggcgggcgcgcggcgtggtctc
gcgccttcggccgtcactggcgtggatgttcctgcagcccgccatacgttttcggatgcg
ctgacccggctcttccttggctacgcgctgcccgatggcggcgctcctgtcgacgaatgg
ctgcccgtggaaggcgcgcacggatcggattcggagctgctcgggcggttgacgcgtttc
atcgacgatatcgatgccttcggcgagcgcgtcgccacaccacgcccgcccgcggcgtgg
acacaaacgctgctcgccgcgctcacgcaatttttcgatgctggcctgccgttcgccgat
tcgatcgccgatgtgcgcgcaacgctcgactcgctgatgctttcaatgaacgagggcgcg
gccgaaagcgaaatttccgcagatgtattacgcacggcgctgacggatgccctggacgat
gccgcgcgtggcggcgtgccgtggggcggtgtgacgttttcgtcgctgacgagcttgcgc
ggcttgccgtatcgcgtgatctgtttgctcggcatggacgacggcatgttgccaagtctc
gcgcgtgccgacgaattcgacctgatggcaagtttcggcaagctcggcgatcgtcaacgc
cgcgacgacgagcgcaacttgttcctcgacttgctgctggctgcacgcgatcgattgatg
atcgcgtacaccggacgcagcattcgcgacaacgccgcactgccgcccgctgcgctgatc
gatgaactgctcgatcatctcgccgtgacggtcgcgggagacgacgcgtcgcctaaggaa
ctcgaagcggcacgcagccgctttgtgttcgagcatccgctgcaaccattcgcgcctgag
tacttcagcaatcccttgttcacctatgagcccgagcgtgcagagcttgcccggacgctg
gcgctcggcaagaccgagccgtcggtcagattcttcggcgtgccgttgccggcggaagac
gtcgaacccatcgccttcgatgacttcgagcgattttggcgccatccggcgcgagcgatc
ctgcgcgatcgtcttggcatcgcgctgttcgacgctgaaagcgaactcggcgataccgaa
ccgttcgagcttgaatatcccggccgtgcggcgctcgctgaccgtgtgttgccgtcgctg
cttgaactcaccgttgaaaacgaaactcgtgcgctcgatcgcgcgcgccgggttgcgcgt
gcaagtccggaaatgccgggcggtgcgacgggcggcgtgtggcaatcacgcgagatcggc
gcgttgcattcgcttgccaatcgcgttcggatcgcaacggaagtaggcgcgtcgcgtttg
ccttttgcgttggacatcgcgccgcgctggcccgacgccgaactcttcggacgctatgac
gcgacgttgcaggcggacgccctgcaaccaatgcaaatccacggcacgttgaatctgctg
accgacgaaggccagatcatctaccggtacgacgtcccgcgtgcgcgcgattatctgtcc
gcgtggcttgcccatctcgcgtattgcgccgcgctgcccgacggtccgaggcgcacggta
tggcacgggcgcggcgcgcaatcgagcggtttcgaactgacgcctgtcgcagaccctcta
gctcaccttgcgacgcttgcggcgctttatcgcgcgggacggagattgccattgcggttc
ttccccaagagcgcgtggacgtgggtaacggagagcgaatccaaggcgcagggcgtgtgg
gtatcggacaggacgcgtggcgagtcggatgatcctgctttgcgcatcgcgtttcgtggc
tcggatctgagactcgatgaaactttcgccacgctcgctcgtctcgttttcgagccgctc
aagcagcacttgcggagcgacgcatga
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