Burkholderia sp. 2002721687: BW21_488
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Entry
BW21_488 CDS
T03759
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bul
Burkholderia sp. 2002721687
Brite
KEGG Orthology (KO) [BR:
bul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bul03016
]
BW21_488
Enzymes [BR:
bul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BW21_488
Transfer RNA biogenesis [BR:
bul03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BW21_488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJY43908
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All DBs
Position
I:516664..517224
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AA seq
186 aa
AA seq
DB search
MTMASDRLRCFVALTLDRASRDALAALPVAAGARRTPRDQLHVTIAFLGAIERAKSELLG
ARIPALAAAGAVPPVDVERVVCWPSTAHARLVVAELAPQPPLLALGERVGGALRALGLPP
DSRAFRPHVTIARLPRDAHRVTIDGANGAERRTPLALRFETLTLYESVLTRMGAEHRVLA
AAALPK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggcgagcgaccggttgcgctgcttcgtcgcgctgacgctcgatcgggcgtcg
cgcgacgcgcttgccgcgctgcccgtcgccgccggcgcgcggcgcacgccgcgcgaccaa
ctgcacgtgacgatcgcgttcctcggcgcgatcgagcgcgcgaagagcgaactgctcggc
gcgcgcatccccgcgctcgcggcggccggcgcggtgccgcccgtcgacgtcgagcgcgtc
gtctgctggccgagcaccgcgcatgcgcggctcgtcgtcgcggagctcgcgccgcagccg
ccattgcttgcgctcggcgagcgggtgggcggcgcgctgcgcgcgctcggcctgccgccc
gacagccgcgcgttcaggccgcatgtgacgatcgcgcggttgcctcgcgacgcgcatcgc
gtgacgatcgacggcgcgaacggcgccgagcgccgcacgccgctcgcgttgcggttcgaa
acgctcacgctctacgagagcgtcctcacgcgcatgggcgccgaacatcgggtgctcgcg
gcagcggcgctgccgaagtaa
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