Butyricimonas faecalis: D8S85_05225
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Entry
D8S85_05225 CDS
T05785
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
buy
Butyricimonas faecalis
Pathway
buy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
buy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D8S85_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
buy03019
]
D8S85_05225
03009 Ribosome biogenesis [BR:
buy03009
]
D8S85_05225
Enzymes [BR:
buy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D8S85_05225
Messenger RNA biogenesis [BR:
buy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D8S85_05225
Ribosome biogenesis [BR:
buy03009
]
Prokaryotic type
rRNA helicases
D8S85_05225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
PDH_C
CMS1
Motif
Other DBs
NCBI-ProteinID:
AZS29014
UniProt:
A0A3Q9IN81
LinkDB
All DBs
Position
complement(1191524..1193353)
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AA seq
609 aa
AA seq
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MEKFRELGLDGDILKGIADLGFETPSPVQEKAIPVILGEENDLVVLAQTGTGKTAAFGLP
LLQKINPEWNSVQVLVLSPTRELCMQIGSDLKNYSKYLPDIRVTCVYGGTDIRRQMKELQ
KGVHVVVATPGRLVDLLNRKALNIETVFAVVLDEADEMLNMGFQEDLDFILSNTPKDKNT
YLFSATMPKEVERIARNYLVNQKEISVGKKNQGADTVSHQYYMVRAKDCYETLRRIVDCS
PSMYAIIFTRTKNDAQDIAKHLQRDGIDCDALHGDLSQAQRDNVMNAFRAKRLKVLVATD
VAARGLDVDCLTHVINYNLPEDVESYTHRSGRTGRAGKEGISIAIIHSKEKGKLRRIEGI
LKKKFEYKQVPVGEEICRAQLMFYADKILASEDQEDIDRYAPEVYEKFAELSKEELIQHL
VSYEFGKLLKKYKNTADLNISDDDRGGRSERGDRGDRRDRRGRGEETAYSTFMLNVGRED
GLTPRDLMGLINKYSRRRGIGVGGIRIFDTDTKFEIDEESAPDFAVDFSKVLFNGIPLEI
KAIPTRDKGRRRDDRSRGEFSGRRERRDRDKKDHRGGGRREEKSGGKRRGRPGSDPKKPR
NFNRSSSRG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatttagagaattaggattagacggggacattcttaaaggaattgcagattta
gggtttgaaacaccgagtccggtacaagagaaggctatccctgttattttgggcgaagaa
aatgatttggttgtgttagcccagaccggaacgggaaaaacagcggctttcggattgccg
ttattacagaaaattaatccggaatggaatagtgtgcaggtactggttctgagtcccaca
cgtgagttgtgtatgcagatcgggagtgatttgaagaactattcaaagtaccttccggat
attcgtgtgacctgtgtgtacgggggaacggacataaggagacaaatgaaggaactgcaa
aaaggggtacacgtggttgtggctactccgggacgtttggtcgacttgttgaaccggaaa
gcgttgaatatcgagaccgtgtttgccgtcgtgctggatgaggccgatgagatgttgaac
atgggattccaggaagacttggattttatcttgagtaacacgcctaaggataaaaatacg
tacctgttttcggcaacaatgcctaaagaggtagaacggattgcccggaattatctggtg
aaccagaaggagatttccgtgggtaagaaaaatcagggtgcggatacggtatctcaccaa
tattatatggttcgtgcgaaagattgttacgaaacgctacgccgaattgtggattgctcc
cccagtatgtatgctattatttttactcgtacgaagaatgatgcgcaagatatagcgaag
catttgcagcgtgacgggattgattgcgatgcattacacggggatctgagccaagcgcaa
cgggataacgtgatgaacgctttccgggcgaaacgattgaaagtattggtggcaacggat
gtggctgcccgcgggttggacgtggattgtttgacacacgtgatcaactacaatttgccg
gaagacgtggagagctatacgcatcgtagcggtagaacgggacgtgccggaaaggaaggt
atttccatcgccattattcactcgaaagagaaaggaaaattacgccggattgaaggtatc
ttgaagaagaagttcgagtacaagcaagttccggtaggagaagagatttgtcgggcacaa
ttgatgttttatgcagacaagattttagcatcagaggatcaggaggatattgatcggtat
gctcctgaggtgtatgaaaaatttgctgaactatcgaaggaagagttgatccaacatttg
gtatcctacgagttcggtaagttactgaagaaatacaagaatacagccgatttgaacatc
agtgatgatgaccggggaggtcgttctgaacgtggtgatcggggagatcgacgtgatcgt
cggggacgtggagaagaaaccgcgtacagcacgtttatgctgaatgtcggtcgggaagac
gggttgacccctcgtgatctgatgggtttgattaataaatattctcgccgtcggggtatt
ggtgtcggaggtatccgtatttttgatacagatacaaaattcgagatcgacgaggagagt
gcccctgattttgctgtagatttcagtaaggtcctctttaatggtattccattggagata
aaggctattcctacgcgtgacaaagggcgtcgtcgggatgaccgaagtcgaggcgagttt
tctggaagacgggaacgtcgtgaccgggacaagaaagatcaccggggcggcggacgccgg
gaagaaaagagcggtggaaagagaaggggaagaccgggaagtgatccgaaaaaaccgaga
aatttcaacagatcctcttctcgcggctag
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