Beta vulgaris (sugar beet): 104888022
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Entry
104888022 CDS
T03548
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1A
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04120
Ubiquitin mediated proteolysis
bvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104888022
04120 Ubiquitin mediated proteolysis
104888022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104888022
Enzymes [BR:
bvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104888022
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104888022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
FlxA
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING_11
zf-HC5HC2H
DUF5320
zf-RING-like
Prok-RING_4
Zn-ribbon_8
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104888022
NCBI-ProteinID:
XP_010671135
LinkDB
All DBs
Position
3:2088673..2094762
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AA seq
540 aa
AA seq
DB search
MVRLKPYAGLSLFATFAVVYHAFHSRRQFYPAMVYLSTSKISLVILLNMGLVILCSLWQL
AKRVFLGRLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKSLHWLA
QKRVEFIETTPAVPTLSHVRIVSFMGFLLFLDGVFLYSSVKSLIETQQASVSIFFSFEYM
ILATTTVAMFMKYIFYVSDMLMEGQWEKKAVCTFYLELIRDLLHLSMYLCFFMVIFVNYG
VPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELNTSDATCIICREEMT
TAKKLRCGHIFHVHCLRSWLERQNTCPTCRALVLPPETGTTAAGGQPGLQSGVHQSASTS
APGQSSTGATGPDSTLNGNQARLQAAAAAAAIYEKSLVYPSANSSVWCPGYAVLPPVYNA
MRGPSTANFDEGQGSVGQFQHQQLMSSGQMNIPYVQLSPFAAPPVEVPAAARDGGSHLSI
DSQKNLLEQQIQMLQSQLEYLQKQELDKGASSSNSSSAATNGQTTESSSDACSQTNIKES
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggctaaaaccatatgctgggttaagtttgtttgcaacatttgctgttgtttat
catgcatttcatagtagaaggcagttttaccctgccatggtttatctttcgacgtcgaag
atcagtttagtgatacttcttaacatgggtttggttatactgtgttctttgtggcaattg
gcgaaacgggtgtttcttggacggcttcgagaggccgaggttgagaggctgaatgagcag
tcatggagggaggttatggagattttgtttgccataactattttccggcaggatttttcg
gtgtcgtttcttgctatggttactgcacttctcttgatcaagtcgttgcattggctggca
caaaagagggtggagtttattgaaacaacaccagctgtgcccacattgtctcatgttagg
attgtctcttttatgggtttccttcttttcctagacggcgtattcctgtatagctcggtg
aaatctttaattgagacacaacaagcttcagtgtccatctttttctcattcgagtacatg
atacttgctacaacaactgtggctatgtttatgaagtacatattctatgtgagcgacatg
cttatggaagggcaatgggagaagaaggctgtgtgtacattctacctggagcttattcga
gacttgctgcacttgtctatgtacctctgtttctttatggtgatttttgtgaattatggt
gtgcctttgcatcttataagagagctatacgagacattccgcaactttaaaattcgtatt
gccgattacattcgctatcggaagattacttctaatatgaatgaccgttttccagatgca
accccagaggaactaaatacaagtgatgcaacttgcattatatgtcgtgaggaaatgact
acggccaagaaattgagatgtggacatatttttcatgtacattgtcttcgatcgtggttg
gaaagacaaaatacttgtcctacctgcagggcccttgttctaccacctgaaactggaaca
accgcagctggagggcaacctggattgcagtctggtgtacatcaatctgcttctactagt
gcacccggtcaaagttcaactggtgctactggtccagacagcactttgaatggtaatcag
gctagactccaggctgcagctgctgctgctgcaatttacgagaaatctcttgtttaccct
tctgctaattcgtcagtatggtgtcctggatatgccgtacttccaccagtttataatgct
atgcgtggtcctagtactgcaaattttgatgaagggcaaggttcagttggacaatttcag
catcaacaactgatgtccagtgggcaaatgaatattccttatgtccagttgtctcctttt
gctgctccaccggtcgaagtacctgctgccgcgagagatggaggcagtcatctttcaatt
gactcccagaaaaatctccttgaacagcaaattcagatgttacagagtcaacttgagtac
ctgcaaaaacaagagctggataaaggtgccagctctagcaactcctcatcggcagctacc
aatggtcaaactacggaatcaagctcagatgcttgttctcagacaaatatcaaagaatca
tag
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