Bradyrhizobium vignae: BRAD3257_8561
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Entry
BRAD3257_8561 CDS
T06968
Symbol
hrpB
Name
(GenBank) ATP-dependent RNA helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
bvz
Bradyrhizobium vignae
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvz03019
]
BRAD3257_8561 (hrpB)
Enzymes [BR:
bvz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BRAD3257_8561 (hrpB)
Messenger RNA biogenesis [BR:
bvz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BRAD3257_8561 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
Flavi_DEAD
ResIII
AAA_30
HA2_N
AAA_19
Motif
Other DBs
NCBI-ProteinID:
SPP99146
UniProt:
A0A2U3QCL7
LinkDB
All DBs
Position
BRAD3257:complement(7804166..7806640)
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AA seq
824 aa
AA seq
DB search
MPRSFDTPLPIDAVLDDLSCTLEANNAAVLVAPPGAGKTTRVPLALLDAPWAKDKKIIVL
EPRRIAARASADRMAKSLGERAGETVGYRVRFGSKISRATRIEVVTEGIFTRQILDDPEL
SGVAAILFDEFHERSLDADLGLALARDAQTGLREDLRILVTSATLDGARVAKLLGDAPVV
ESEGRAFPVETRYLGRKADAPIERQMADAIASALRADSGSVLAFLPGAAEIRRTQTFLGE
RVQDASIEIVPLFGALDAAVQDRAIAPAPKGTRKVVLATSIAETSLTIEGVRIVVDCGLA
RVPRYEPDIGLTRLETVRASRAAVDQRRGRAGRTEPGVCYRLWDEPQTASLAPYTQPEIL
SADLSSLVLDLAQWGVSDPAALAFLDPPPQPAWKEAKSLLTELNALDGDGRITAEGKSLR
SLALPPRLARMIVDSHRVGSGEAAAEIAAIITERGLGGDSVDLEHRRHQFRRDRSPRAAS
ARDLARRWASQVAASEKVAQQEDLSTGLMLAYAFPDRVARNRGNGSFVLANGRGAAVEQT
SSLARAPYIAIGEMTGTAASGRILLAAQITQDEIERHFAEHIETADEISFDRGAMALRAR
RKRVLHAMTLSEATLALSPSEETARILADGLIAAGLDRLPWSKAARQWRDRVMFLRKAEG
DSWPDLSDGGLIARREDWLVPALYDKVALKDISAGDLSDALMALLPWEMRARLDREAPTH
FEAPTGSMLAIDYEAEQGPTIAVRLQELFGLNTHPSIAAGKVPLVLELLSPAQRPVQVTR
DLPGFWRGSYAAVRSDLRGRYPRHPWPDDPASAVPTRRAKPRGT
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
ttgccccgcagcttcgacacgcccctcccgatcgatgccgtgctcgacgatttgtcgtgc
acgctggaggccaataacgccgccgtgctggtggcgccgcctggcgccggcaagaccaca
cgcgtgccgctagccttgctcgatgcgccctgggccaaggacaagaagatcatcgtgctg
gagccgcgccgcatcgccgcgcgcgccagtgccgatcgcatggccaaatcgctcggcgag
cgcgctggcgagaccgtcggctatcgcgtccgcttcggctcgaagatctcgcgcgccacg
cgcatcgaggtggtgaccgagggcatcttcacgcgccagatcctcgacgaccccgaactc
tccggcgtcgccgccatcctgttcgacgaattccacgagcgctcgctcgatgccgatctt
ggcctcgcactggcgcgtgatgcgcaaaccggcctgcgcgaagacttgcgcatcctcgtg
acgtcggcaacgctcgacggtgcgcgggtcgccaagctgctgggagatgcccccgtcgtc
gagagcgagggacgcgcctttccggtcgagacgcgctatctcggccgcaaggcggacgcg
ccgatcgagcgccagatggcggatgcgatcgcctccgcgctccgggccgatagcggctcg
gtgctggcgttcctgccgggtgccgccgagatccgccgcacccagacctttctcggcgag
cgcgtgcaggatgctagcatcgagatcgtgccgctattcggcgcgctcgatgccgccgtg
caggaccgcgccatcgcgccggcgccgaagggcacacgcaaagtggtgctggcgacctcg
atcgcggagacctcgctcaccatcgaaggcgtgcgcatcgtggtcgattgcggtcttgct
cgcgtgccgcgctatgagcccgatatcggcctgacgcggctcgagaccgtgcgcgcctcg
cgcgcggcggtggaccagcgccgcggccgcgccggccgcaccgaacccggtgtctgctac
cggctctgggacgagccgcagaccgcctcgctggcgccttacacgcagccggaaatcctc
agcgcggacctgtcctcgctcgtgctcgatctcgcgcaatggggcgtcagcgatcctgcg
gccctggcgttcctcgatccgccgccgcagccggcctggaaggaagcaaagagcctgctg
accgagctcaacgcactcgacggcgacggccgcattaccgcggaaggcaagagcctgcgt
tcgctggcgctgccgcctcggctggcgcgcatgatcgtggattcgcaccgtgtaggcagc
ggcgaggctgccgccgagatcgccgccatcatcaccgagcgcggccttggcggcgacagc
gtcgatctcgagcaccgccgccaccagttccgccgtgaccgctcgccgcgcgctgcgagc
gcgcgcgatctggcgcgccgctgggcctcgcaggtcgcggcgtcggagaaagtggcgcag
caggaggatctctcgaccggcctcatgctcgcttatgcattcccggatcgcgtcgcgcgc
aaccgcggcaacggcagcttcgtgctggccaacggccgtggcgctgccgtcgagcagacc
tcctcgctcgcccgcgcgccctacatcgcgatcggcgagatgacggggacggcggcgagc
ggacgcatcctgctcgcggcgcaaatcacccaggacgagatcgagcggcatttcgccgag
catatcgagaccgccgatgagatctccttcgaccgcggcgcaatggcgctacgcgcgcgg
cgcaagcgcgtgctgcacgcgatgacgctgtccgaagccaccctcgcactgtcgccttcc
gaggaaaccgcgcgcattctcgccgatggattgatcgccgccggtctcgaccggctgccc
tggtcgaaggccgccaggcagtggcgtgaccgtgtgatgttcctgcgcaaggccgagggc
gacagctggcccgatctgtccgacggcgggttgatcgcgcgacgtgaggattggctggtg
ccggcgctctacgacaaggtcgcactcaaggatatctccgcgggcgatctctccgacgcg
ctgatggcgctcttgccatgggagatgcgcgcgcggctcgaccgcgaggcgccgacgcat
ttcgaagcgccgaccggaagcatgcttgcgatcgactacgaggccgagcaggggccgacc
atcgcggtgcggctccaggaattgttcggcctcaacacccatccgtcgatcgccgccggc
aaggtgccgctggtgctggaattgctgtcgccggcgcagcgcccggtccaggtgacgcgc
gatctgcccggcttctggcgcggcagctacgccgccgtccgctccgatctgcgcggccgc
tatccgcgccacccctggcccgacgatcccgcgagcgcagtgccgacaaggcgggcgaag
ccgcgcgggacgtga
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