Bacillus mycoides KBAB4: BcerKBAB4_3640
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Entry
BcerKBAB4_3640 CDS
T00642
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03030
DNA replication
bwe03430
Mismatch repair
bwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BcerKBAB4_3640
03430 Mismatch repair
BcerKBAB4_3640
03440 Homologous recombination
BcerKBAB4_3640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwe03032
]
BcerKBAB4_3640
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_3640
Enzymes [BR:
bwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BcerKBAB4_3640
DNA replication proteins [BR:
bwe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BcerKBAB4_3640
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BcerKBAB4_3640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABY44811
UniProt:
A9VT55
LinkDB
All DBs
Position
complement(3688149..3692450)
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFQILLQQLQIPEDLITQYLHGGGIEKLVIDKANKSWHFDLQVPRILPTEL
YELLETKLKQSFSHIARTTFALEAENKQFTEEEVKAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLLNVNNELESTTLKKNVAKPVGDQYEAFGFPRFQLDTHIKQNAEEMQKFREQTQ
EEDRQRVIQAMEEMAKRQAEESDVVHEGPVVLGYLIKPDEEITPLREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGTWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAKEGEKRVELHLHTPMSQMDAVTSVSKLVAQAGKWG
HEAIAVTDHAVAQSFPEAYSAGKKAGVKVLYGVEANLVNDGVPIAYNEAHRLLAEETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGIEKTKNPVIDTLELARFLFPE
MKNHRLNTMCKKLDIELTQHHRAIYDTEATGYLLVKMLKDVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLDPEDAIYRKILVSSQGGANPLNRHSLPPVHFRTTNEMLDCFSFL
GEDKAKEIVVTNTHKIASLIGDVRPVKDDLYTPKIEGADDETRDMSYIMARSIYGDELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPTCNVPYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKLLFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQFPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEEMRNNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRVKIDEIAQK
GLDAAPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATEFIIDGDTLIPPFNAVPGLGT
NAAFSIVEARKNGDFLSKEDLQQRSKVSKTIIEYLDGQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaacaaatgaacaacaagagcgatttcaaattttgctccaacagttgcaaata
ccagaagaccttataactcaatatttacatggcggtggtattgaaaagctagttattgat
aaagcgaataaaagttggcattttgacttacaagtgccacgtattttgccgacagaatta
tatgagttgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaagcagagaataaacaatttacagaagaagaagtaaaggcatattggccgctt
tgtacagaacgaattacattttcacctatgttcgcgtacttaaagaagcaacttccgcag
gtcaatggcgtgaagttgctattaaatgtgaataatgagctggaatctactactttaaag
aaaaacgttgcgaaaccagtaggtgatcaatacgaagcttttggattcccgcgttttcag
ttagacacacatataaagcaaaatgcagaagaaatgcaaaagtttcgtgagcagacacag
gaagaagatcgtcaacgagttatacaggctatggaagagatggctaaaaggcaagctgaa
gaaagtgatgttgttcatgaaggaccagttgtgcttggttatcttattaagccagatgaa
gagattacgccgctgcgtgaaattcaagatgaagaaagaagaaaaaccgttcaagggtat
gttttccatgtagagacgaaagaacttcgtagtggacgtacattattaactttaaagata
actgactatacggactctattatgattaagatgttctcacgtgataaagaagatatcccg
atgttacaatccttgaaaaaaggaacttgggtaaaagcgcgtggttcagttcaaaatgat
acattcgtgcgtgatttagttatgatcgcaaatgatataaatgaaataacgggaccttct
cgtaaagataaagcaaaagaaggagaaaaaagagtagaacttcatcttcatactccaatg
agtcaaatggatgctgttacttctgtttctaagctcgttgcccaagccggaaaatggggg
catgaggctattgcagttacagaccatgctgttgcacagtcgttcccagaagcatattct
gctggtaaaaaggctggagttaaagttctatatggtgtagaagcaaatttagttaatgat
ggtgtgccgatagcatataacgaagcacatcgtctacttgcagaagaaacatatgttgtc
tttgacgttgagacaacagggttatctgctgtatatgatacagtcattgagttagctgct
gtaaaggtaaaaggtggagaaattattgatcgctttgaatctttcgcaaatcctcatcaa
ccattatcggcgacgattattgaattaacaggtattacagatgatatgttaactgatgca
ccagaagtggacgaagtgtttaaaaagtttgaggaatggatgggtgaccatacacttgtt
gctcataacgcaagcttcgatatgggctttattaacgtaggttttaaaaaggctgggata
gaaaaaacgaaaaatccagttattgatacgttagaacttgcacggttcttattcccagaa
atgaaaaatcatcgattaaatacgatgtgtaaaaagcttgatattgaattaacgcaacat
caccgtgcgatttatgatacagaagcaacgggatatttacttgtgaagatgttaaaagat
gtgattgaaaagggatttgaatatcacgatcaactaaacgatagtatgggacaaggggat
gcgtataaacgtgggcgtccaagtcatatgacgttacttgccacatcagatgttgggttg
aaaaacttatataaacttgtttcatattctcacttgaattacttttatcgtgtaccacgt
gtaccacgatcactattaaaaaaatatcgcgaaggcattttagtaggaacagcttgtgac
aaaggtgaagtatttgaagctatgatgcaaaaagcgcctgaagaagtagaagaaattgca
cagttttacgattacattgaggttatgcctccagaagtgttacgtcatttagtggaacgt
gaactcgttcgagatgaaggacagttaaaaacaataatttctaacttagtaaaactaggt
gagacgttagataaaccagttgttgctactgggaatgtgcattatttagatccagaggac
gcgatatatcggaaaattttagtcagttcgcagggaggagctaatccgttaaatcgccat
tcattaccgcctgtacatttccgtacaacaaatgaaatgctagattgtttttcattctta
ggtgaagacaaagcaaaagaaattgttgtgacaaatacacacaagatcgcatcattaatt
ggtgatgttcgtccagtaaaagatgatttatacacaccgaaaattgaaggtgctgatgat
gaaacacgtgatatgagctatataatggcaagaagtatctatggagatgaactaccggaa
attgtagaagctcgtttggaaaaagaattgaaaagtattattggacatggattcgccgtt
atttatttaatttcacataagcttgtgaaaaaatcgttagtggacggttatctagtaggt
tcgcgtggatcggtaggttcatcatttgttgcaacgatgatggaaattacagaagtaaac
ccattaccaccgcactatgtatgtccaaagtgtaaacaatcagagttctttaatgacggt
tctgtaggttctggttttgatttaccagataaagaatgcccaacatgtaatgttccatat
gtgaaagatgggcatgacattcctttcgaaacgttccttggatttaaaggggataaggta
ccggatatcgatttgaatttctccggagaataccaaccacgcgcccataactatacgaaa
ttactgttcggtgaagattatgtataccgcgcaggaacaattggtacggttgcggaaaaa
accgcttatgggtatgtgaaaggttatgctaatgatcataacttaacaattcgaaatgca
gagattgatcgcttagttgcgggatgtacaggtgtaaagcgtacgaccggacagcatcca
ggtggtattatcgttgtaccagattacatggatatttttgacttttcaccaattcagttt
ccggctgattcaataggtgctgagtggagaacaacgcactttgacttccactcaattcat
gataatttattgaaacttgatatattaggacacgatgatccgactgttattcgtatgctt
caagatttaagtggtattgacccgaaaacaatcccaacggatgatccagaagtaatgaaa
attttctctggtccagagtctttaggggtaacggaagaacaaattaactgtaaaacaggt
acacttggtataccagagtttggtacgaaattcgtaagacaaatgttagaagaaacgaaa
ccaacgacgttttcagagcttgtccaaatttctggactgtcccatggtacagatgtatgg
ttaggtaatgcgaatgaattaatttataacggtacgtgtacactgagtgaagttatcggt
tgtcgtgatgacatcatggtatatttaatttatcaaggcttggatccatcattagccttc
aaaatcatggagtcggtgcgtaaaggtaaaggtgtaccagaagaatgggaagaggaaatg
agaaataacaatgtaccaggttggtatattgattcatgtaagaagattaagtacatgttc
cctaaagcccatgcggctgcttacgtacttatggctgtacgtattgcatactttaaagta
catttcgcacttttattctatgcggcatattttacagttcgtgcagatgactttgatgta
gaggcgatggcgaaaggttcagcatccatacgtgtaaaaattgatgaaattgcacaaaaa
ggattggatgcagcaccgaaagagaagagtttattaacggtactagaaatgacacttgaa
atgtgtgagcgtggttattcattccaaaaggttgatttataccgctcgcatgcaaccgaa
tttataattgatggggatactttaattcctccatttaatgcagttcccggtcttggtaca
aacgcagctttcagtattgttgaagctcgtaaaaatggtgatttcttatcaaaagaagac
ttacagcagcgcagtaaggtttctaaaacgattattgagtatttagatggtcaaggttgt
ctaggagatttaccggatcaaaaccaattgtcactgttctaa
DBGET
integrated database retrieval system
