Bacillus mycoides KBAB4: BcerKBAB4_5303
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Entry
BcerKBAB4_5303 CDS
T00642
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03030
DNA replication
bwe03430
Mismatch repair
bwe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BcerKBAB4_5303
03430 Mismatch repair
BcerKBAB4_5303
03440 Homologous recombination
BcerKBAB4_5303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bwe03032
]
BcerKBAB4_5303
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_5303
Enzymes [BR:
bwe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BcerKBAB4_5303
DNA replication proteins [BR:
bwe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BcerKBAB4_5303
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BcerKBAB4_5303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FrhB_FdhB_C
Motif
Other DBs
NCBI-ProteinID:
ABY46797
UniProt:
A9VVI2
LinkDB
All DBs
Position
pBWB403:complement(12101..12916)
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AA seq
271 aa
AA seq
DB search
MNNVLAQPQAKEIFTVFDLETTGLDYKNEQVVEIAAIRTDLEQELGRMHILVKLNEGKKL
PDFLVDNTDLRDYMLVNGMVEHQALINLMAFMGNSIVVAHYAPFDFAYLFKALIAPELFL
CTRSIERLLTPDKSASLAPTAERRGVKLEGAHRAMNDIEATIGVLKSQLSEIKERGIKRS
VVQNMIVDSPERPNKFTPRHAKVKTSKEFKLVGKKVKITQTGNDFGKVGVVLDAYINGKI
TDEMDGTQIVIIRTDEGDELIKYAEHTKVVK
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgtactagcacaaccacaagcaaaggaaatattcacggtattcgacctcgaa
actactggactagattacaagaacgagcaagtagttgaaatcgctgctatccgaacggac
ttagaacaagaactaggtcgcatgcatattctcgttaaattaaacgaaggcaagaagtta
cccgacttcctagtcgataacacagacttacgtgactatatgctagtaaacggaatggtc
gaacatcaagcgcttatcaatcttatggcattcatgggcaacagtattgtagtcgcacac
tatgcgccatttgatttcgcatacttattcaaagcattgattgcgcctgaactattctta
tgtactcgctcaatcgaacgattactaacgcctgataaatctgcgagtctagcaccaaca
gctgaaagacgtggcgttaaactggaaggcgctcaccgagcgatgaatgatatcgaagca
actatcggcgtattgaaatcgcaactatccgaaataaaagagcgaggaattaaacgatct
gtagttcaaaacatgattgtcgattcgcccgaacgtccgaacaaattcacaccgagacat
gcgaaagtgaagacatcgaaagagttcaagctagtcggaaagaaagtgaagattacgcaa
acaggtaatgacttcggtaaagtaggcgtcgttcttgatgcgtacatcaacggtaagatt
actgacgaaatggacggcacacaaatcgtaatcatcagaactgatgaaggcgacgagtta
atcaaatacgctgaacatacgaaggtggtgaagtaa
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