Paraburkholderia xenovorans LB400: DR64_6155
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Entry
DR64_6155 CDS
T03290
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00250
Alanine, aspartate and glutamate metabolism
bxb00310
Lysine degradation
bxb00350
Tyrosine metabolism
bxb00650
Butanoate metabolism
bxb00760
Nicotinate and nicotinamide metabolism
bxb01100
Metabolic pathways
bxb01120
Microbial metabolism in diverse environments
Module
bxb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DR64_6155 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DR64_6155 (gabD)
00310 Lysine degradation
DR64_6155 (gabD)
00350 Tyrosine metabolism
DR64_6155 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
DR64_6155 (gabD)
Enzymes [BR:
bxb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
DR64_6155 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
DR64_6155 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
DR64_6155 (gabD)
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GFIT
Motif
Pfam:
Aldedh
DUF6066
Motif
Other DBs
NCBI-ProteinID:
AIP36984
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All DBs
Position
2:complement(1949579..1951030)
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AA seq
483 aa
AA seq
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MTLKDPSLLKTHAYIAGEWQGADDGSTFEVKNPATGEIIATVPRMGTAETRRAIDTANAA
WPAWRATTAKQRAVILRKWHDLMMENADDLAKILTTEQGKPLAEAKGEIQYAASFLEWFA
EEGKRVNGDTIPTPANDKRIVVTKEPIGVCAAITPWNFPAAMITRKVGPALAAGCPIIVK
PAEATPLSALALAVLAERAGVPRGVFNVVTGEPKAIGAEMTGNPVVRKLSFTGSTPVGRL
LMAQCAPTVKKVSLELGGNAPFIVFDDADLDAAVAGAIASKYRNSGQTCVCTNRFYVHDK
VYDAFAEKLRVAVEQLKVGRGTEDGVTQGPLINEAAVLKVESHIEDALAKGARIVTGGKR
HVLGHGFFEPTVLADVTPAMKVARDETFGPLAPLFRFSSDEEVIRLANDTEFGLASYFYS
RDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCV
GGI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
ttgaccttgaaagacccgtcgcttctgaaaacgcacgcgtacatcgcgggcgaatggcaa
ggcgcggacgacggctcgaccttcgaagtgaagaaccccgccacgggtgaaatcatcgcg
accgtgccgcgcatgggcacggcggaaacccgccgcgcgatcgacacggccaacgccgcg
tggcccgcctggcgcgccacgaccgcgaagcagcgagcggtgatcctgcgcaaatggcac
gacctgatgatggagaacgccgacgatctggcaaagatcctcaccacggaacaaggtaag
ccgctcgccgaagccaaaggcgaaatccagtacgccgcttcgttcctcgaatggttcgcg
gaagaaggcaagcgcgtgaacggcgacaccatcccgacgccggccaacgacaagcgcatc
gtcgtgacgaaagaaccgatcggcgtgtgtgccgcgatcacgccgtggaacttccccgcg
gcgatgatcacgcgcaaggtcggtccggcgctggcggcgggctgcccgatcatcgtcaaa
ccggctgaagccacaccgctctccgcgctcgccctcgccgtgctggccgaacgcgccggc
gtgccgcgcggcgtgttcaacgtcgtcaccggcgagccgaaagccattggcgcggaaatg
acgggcaatccggtcgtgcgcaaactgtcgttcaccggttcgacgccggtcggccgtttg
ctgatggcgcagtgcgcgccgacagtcaagaaagtgtcgctcgaactcggcggcaacgcg
ccgttcatcgtattcgacgacgcggatctggatgccgcagtggccggcgcgattgcgtcg
aagtatcgcaatagcggccagacctgtgtgtgcacgaaccgtttctatgtgcacgacaag
gtctacgacgcgttcgccgaaaaactgcgcgtcgccgtcgaacagctcaaggttggccgc
ggcaccgaagacggcgtgacgcaaggtccgctgatcaacgaagccgccgtgctcaaggtc
gagtcgcatatcgaagacgcgctcgccaaaggcgcgcgcatcgtcaccggcggcaagcgt
catgtgctcggccacggcttcttcgagccgaccgtgctcgcggatgtcacgccggccatg
aaggtggcacgcgacgaaaccttcgggccgctcgcgccgctgttccgcttctcatcggac
gaggaagtgatccgcctcgccaacgatacggagttcggtctcgcgtcgtacttctatagc
cgcgatatcggccgcgtctggcgggtcgccgaagcgctggaatacggcatggtcggcatc
aatacgggcctcatctcgaatgaagtcgcgccattcggcggcgtcaagcaatcgggcctg
ggtcgcgaaggttcgcattacggtatcgatgattacgtggtcatcaagtacctgtgcgtc
ggcgggatctga
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