Burkholderia sp. YI23: BYI23_A010330
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Entry
BYI23_A010330 CDS
T01711
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BYI23_A010330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_A010330
Enzymes [BR:
byi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BYI23_A010330
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BYI23_A010330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SGNH
Motif
Other DBs
NCBI-ProteinID:
AET88871
LinkDB
All DBs
Position
1:1167108..1168025
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AA seq
305 aa
AA seq
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MALDESLVEELGFGPVWVRRGVTAVPAREEVIDAPAAVEAPRVTEAPETPTPVELRAEPK
PAQAPPPAAQPESDIPPLDAYDDLPWTDEAPIHVEPALVDAPSDVHTLDWDALAERVANC
ELCRLCERRTNTVFGVGDREADWMLIGEAPGENEDKQGEPFVGQAGKLLDNMLRALALSR
QTNVYIANVIKCRPPGNRNPELDEVARCEPYLQRQVELVKPKVIVAMGRFAAQSLLKNEA
SIASMRGRVHAYRGVPVIVTYHPAYLLRSLQDKSKAWADLCLARNTYREALAALGVEQGA
QKDGV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgatgaatcgctggtggaggagttgggcttcgggccggtctgggtccgtcgc
ggagtcacggctgtgccggcgcgcgaggaagtgatagacgcgccggctgccgtcgaggcg
ccgcgtgtgacggaagcgcctgaaacgccgacgcccgtcgaactgcgcgcggagccgaag
cctgcgcaagcgccgccgcccgctgcacagcccgaatccgacatcccgccgctcgacgcc
tacgacgatctcccctggaccgacgaggcgccgatccacgtcgagcccgccttggtcgac
gcgccgagcgacgtccacacgctcgactgggacgcgctcgccgaacgcgtcgcgaactgc
gaactgtgccgcctgtgcgagcgccgcacgaacacggtcttcggcgtcggcgatcgggaa
gccgactggatgctgatcggcgaagcgcccggcgagaacgaggacaagcagggcgagccg
ttcgtcggccaggcgggcaagctgctcgacaacatgctgcgcgcgctcgcgctgtcgcgg
cagacgaacgtgtatatcgccaacgtgatcaaatgccggccgcccggcaaccgcaatccc
gaactcgatgaagtcgcacgctgcgagccgtacttgcagcgccaggtcgagctcgtgaag
ccgaaagtcatcgtcgcgatgggccgcttcgccgcgcaaagcctgctgaagaacgaagcc
agcatcgcgtcgatgcgcgggcgcgtgcacgcgtatcgcggcgtgccggtcatcgtcacg
tatcacccggcgtatctgttgcgcagcctgcaggacaagtcgaaggcgtgggccgatctc
tgcctcgcgcgcaacacctatcgcgaggcgctcgccgcgctcggcgtcgagcagggagcg
cagaaggacggcgtctga
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