Burkholderia sp. YI23: BYI23_B011400
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Entry
BYI23_B011400 CDS
T01711
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
byi
Burkholderia sp. YI23
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
byi03032
]
BYI23_B011400
03400 DNA repair and recombination proteins [BR:
byi03400
]
BYI23_B011400
Enzymes [BR:
byi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BYI23_B011400
DNA replication proteins [BR:
byi03032
]
Prokaryotic type
DNA Topoisomerases
BYI23_B011400
DNA repair and recombination proteins [BR:
byi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BYI23_B011400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AET91747
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All DBs
Position
2:complement(1312595..1313920)
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AA seq
441 aa
AA seq
DB search
MTTKADQARHTVATIDKDSDAGGPQGCPEDLPPGLRYMDDARRGYTREWIDGAFAYFNTQ
GRRIDDEAEIRRINALAIPPAYTAVWICPDARGHLQATGRDARGRKQYRYHPQWRETRDA
NKYERMLAFSAVLPRLRARVARDLSLDGMPRDKVLATVVRLLDTTLIRVGSEEYARENRS
YGLTTLRKRHLKVSAGTLRFKFRGKSGIEHDVAVSDARVARIVKRCLDLPGQDLFQYLDE
DGERHALSSSDINDYLREITGADFTAKDYRTWAGSVFALAALRKLEWETVTEARKHVVGT
IKDVAQLLRNTPAVCRKCYVHPAVIEAFEAGELAQAMPASRRNGLKTDEAALAIFLEKDA
KRRTREAARKNRKGAAPSDTRLTRMLAESSRKARAGALKGSGKSAAAQALDHAAKKPAGK
AARPASKKLGRTRTETAVAIS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaaagcagaccaggcgaggcacacggtggcgacgatcgacaaagacagcgac
gcaggcggcccgcaaggctgtcccgaggacttgccgccgggcctgcgctacatggacgat
gcgcggcgcggctacacgcgcgagtggatcgacggcgccttcgcgtacttcaacacgcag
ggcaggcgcatcgacgacgaagccgagattcgccgcatcaacgcgctcgcgattccgccg
gcgtacaccgccgtatggatttgtcccgacgcgcgcggccatctccaggcaacggggcgc
gatgcgcgcgggcgcaagcagtatcgctatcacccgcagtggcgcgagacgcgcgatgcc
aacaagtacgagcgcatgctcgccttctccgccgtgctgccgaggctgcgcgcccgcgta
gcgcgcgatctgtcgctcgacggcatgccgcgcgacaaggtgctcgccaccgtcgtgcgt
ctgctcgacacgacgctgatccgcgtcggcagcgaagagtacgcgcgcgaaaatcgctcc
tacggactgacgaccttgcgaaagcgccatctcaaggtatcggcgggaacgctgcggttc
aagttccgcggcaagagcgggatcgagcacgacgtcgccgtgagcgacgcgcgggtcgcg
cgcatcgtcaagcgctgcctggatctgccgggacaggatcttttccagtatctcgatgaa
gacggcgagcggcatgctttgagctcgtcggacatcaacgattatttgcgcgagatcacc
ggcgcggacttcacggcgaaggactaccggacgtgggcaggcagcgtgttcgcgctcgcg
gcgctgcgaaagctcgaatgggagacggtgacggaggcgcgcaagcatgtcgtcggcacg
atcaaggacgtcgcgcaactgctgcgcaatacgccggccgtatgccgcaaatgctatgtg
catcccgccgtgatcgaggcgttcgaggcgggcgaactggcgcaggccatgcctgcatcg
cgccgcaatggcctcaagaccgatgaagccgcgctcgcgattttcctcgaaaaggacgcg
aagcggcgcacgcgcgaggccgcgcgcaagaaccgcaagggcgccgcgccaagcgataca
cgtctcacgcggatgctggcggaatcgagccgcaaggcgcgtgcgggcgcgttgaagggc
agcggcaagagcgcggcggcccaggcgctcgatcacgccgccaagaagccggcgggcaag
gccgcgcgcccggcgtcgaagaagctcgggcgcacgcgcacggagacggcggtggcgatc
agctaa
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