Caballeronia sp. SBC2: SBC2_28240
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Entry
SBC2_28240 CDS
T06459
Symbol
rhaS_1
Name
(GenBank) HTH-type transcriptional activator RhaS
Organism
caba
Caballeronia sp. SBC2
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
Clathrin_H_link
Motif
Other DBs
NCBI-ProteinID:
QIE24774
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Position
3112371..3113543
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AA seq
390 aa
AA seq
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MGHVNGMSRLQIVRLPSADSAPASDSSRSNRHESRHEIASGAANESGPGSAHEAMQEAMH
EATQEGKTAPKRIGILIFEDFSLVEVSSISEVFSLANDISTLSDSAAVKSGAPPDYALLF
LSSDGGSVASSCSMRIWTESLDTRWMSECDALFIAGGEGAQHAKLDTALLRRLSRVAPKI
SFVKAIGEGSQILAAANLSLQNRAPDFEDPAAASALTSSLFIAEQTLTLDDPKGPIAAAL
SIIKRDYGPAVAREVSERSIPGAWPKLSAVLDDTDVGGVRQKIDAAARWMRENYIRPISI
ADAARVAAMSERNFLRRFKAQIGLTPSEYLLRARLDASCMLLAATDLPVDKIARRCGAGS
GDGLAKIFRKRLSISPTEYRLAGRRKAAEE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggacacgtcaatggtatgagccgactgcaaatcgtgcgattgccaagtgctgactct
gcgccggcgtccgattcgtcccgctcgaaccggcacgagtccagacacgaaattgcatcc
ggagccgcgaacgaatcaggacccggttcagcacacgaagcgatgcaagaagccatgcat
gaagcgacacaggaaggcaagaccgcaccgaagcggatcggcatactgatcttcgaagac
ttctcgctggtcgaggtaagttcgatatcagaggtgttttcgctcgccaacgacatatcc
acgttgtccgattccgccgccgtcaagtcgggcgcaccaccggattatgcgttgctgttc
ttgtccagcgatggcggcagcgtcgccagcagttgctcgatgcgcatctggaccgagagt
ctggacacgcgctggatgagcgagtgcgacgccctcttcattgccggcggcgaaggcgcg
cagcacgcgaaactggatacggcgttactcaggcggctaagccgggtcgcaccgaagata
tcgtttgtaaaggccattggcgaaggctcgcagatcctcgcggcggcgaacctttcattg
cagaaccgggcgcccgactttgaagacccggcggcggcatccgcgttgacgagttcactg
ttcatcgctgagcagacactgacgctcgatgaccccaagggtccaatcgcggccgccctc
tccatcatcaagcgcgattacggcccggcggtggcgcgcgaagtatcggagcgttccatt
ccaggtgcgtggccgaagctgtccgccgtgctcgacgacaccgacgtaggcggcgtgcga
caaaagatcgacgcagcggcgcggtggatgcgtgaaaactacatccggccgatttcgatt
gcggatgccgcgcgcgtggcggccatgagcgagcgcaatttcctgcgccgcttcaaggcg
cagatcgggttgacgccgtcggagtatttgttgcgggcgcgactggatgccagttgcatg
ctgctcgccgcgaccgatcttcccgtcgacaagatcgcgcgtcgatgcggcgccggcagc
ggcgatggactcgccaagatattccgcaagcgcctgtccatttcaccgaccgaataccgg
ctggccggacgcaggaaagccgcggaagaatga
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