Caballeronia sp. SBC2: SBC2_60890
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Entry
SBC2_60890 CDS
T06459
Symbol
comR_3
Name
(GenBank) HTH-type transcriptional repressor ComR
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_60890 (comR_3)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SBC2_60890 (comR_3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_4
TetR_C_13
TetR_C_6
TetR_C_24
TetR_C_17
Motif
Other DBs
NCBI-ProteinID:
QIE28014
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Position
pSBC2-2:684790..685377
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AA seq
195 aa
AA seq
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MQRGRPREFDVASVSEAAARVFWERGYHSTSLDDLTEATGLLRGSLYGAFGDKRGMLLVA
LDHYAEGAVAKLSERLNSGLPPHEALREALLHHTRVVSALTGIPGCFITNTALEMVPSDP
DVALRIESIMRRISTLLAAAVIRGQAEGVFNPGLNEKAVGDFLLCMTQGLRVLGKVVHEE
ERLTAAVDVAMRALS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcggcagaccgcgtgagttcgacgtggcctccgtgtccgaggcggcagctcgc
gtgttttgggagcgtggctatcactcgacctcgctggacgatcttaccgaggcaacgggt
ctgctgcgcggtagtctttacggcgcttttggcgacaagcgcggcatgctgctcgtcgcg
ctggatcactacgccgaaggagcggtagcgaagttatccgagcggctgaattcgggtctt
cctccacacgaagcgttgcgtgaagcgttgcttcaccatacgcgggtggtttccgcgctg
accggcatacctggctgtttcattacgaataccgcgcttgagatggtgcccagcgacccg
gacgtggcattgcggatagagtcaatcatgcggcgcatatcaaccttgctcgccgcagcg
gttattcgcggacaggcggaaggggtcttcaatccggggttgaatgaaaaagcagtgggt
gattttctgctatgcatgacgcagggcttgagggttctcggtaaggtcgtgcatgaagag
gagcggctgaccgcggctgtcgatgtcgccatgcgggcattgagctga
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