Caballeronia sp. SBC2: SBC2_65900
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Entry
SBC2_65900 CDS
T06459
Symbol
tsaR_4
Name
(GenBank) HTH-type transcriptional regulator TsaR
KO
K14057
LysR family transcriptional regulator, regulator of abg operon
Organism
caba
Caballeronia sp. SBC2
Brite
KEGG Orthology (KO) [BR:
caba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caba03000
]
SBC2_65900 (tsaR_4)
Transcription factors [BR:
caba03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SBC2_65900 (tsaR_4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_20
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QIE28514
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All DBs
Position
pSBC2-2:1241860..1242789
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AA seq
309 aa
AA seq
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MTQLRVFVAVAEAGSLRAAARSLGIAQSGVTQQLRKLETSAGGPLFERGHRGARLTSIGE
RLRIRADVILGECVRTENEMRQLRGELTGQVSLGAAAEAMMRLFPALLASFRERCPRIDV
HLTSATSRVLTAWVRDGSLDFALALVSNEADIHDLEATTLFGSPVTVIARRGHPLGRARS
LRALQDCEWVSTRPRHAGDVANRLSTLFEDAGLEPPRIAATTEAVFDTLHCVANSDYLSL
EPVRLAAHPFFKDHVAVVPIKEQALSTRVCLLRRAGVPLTPVAQELASMAVSFARMLPGT
AVTGESPRE
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcaacttcgcgtattcgtggctgtcgctgaagccggcagtctccgggcggcggca
cgcagcctcggcattgcgcaaagcggcgtgacgcaacagttgaggaaactcgagaccagc
gcaggcggccccttgttcgaacgcgggcatcgcggcgcgcgcctgacctcgatcggggag
cgcttgcggattcgcgccgacgtgattcttggcgagtgcgttcgaaccgaaaacgaaatg
cgccagttgcgcggcgagttgaccggccaggtttcactcggcgccgcggccgaagccatg
atgcgactatttcctgcgctgctggcgagttttcgcgaacgctgtccgcgtattgacgtt
catctgaccagcgccacgtcgcgggtcctgaccgcgtgggtacgcgacggcagcctggac
ttcgccttggcgctggtatcgaacgaagcggatatccatgatctcgaggcgaccacgctg
tttggatcgcccgtcaccgtcatcgcgcggcgtggtcatccgctaggccgcgcgcgatcg
ctgcgggcgctgcaggactgcgagtgggtcagcacccggcctcgccatgcgggcgatgtc
gcgaaccgcctgtccactttgttcgaggacgcagggcttgaacccccgcgtattgcggcc
acgaccgaagctgtgttcgatactttgcattgcgtggcgaacagcgattatctgtcgctc
gaacccgtgcgtctcgcggcacatccgttcttcaaggaccatgtggcggtcgtcccgatc
aaagagcaggcgttgagtacgcgcgtatgcctgctgcgccgcgcaggcgtgccgttgacg
ccggtcgcgcaggaactggcgtccatggcggtgtcgtttgcgcggatgttgcccgggact
gcggtgacgggtgagtcgcctcgcgaatga
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