Chelonoidis abingdonii (Abingdon island giant tortoise): 116827413
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Entry
116827413 CDS
T07367
Symbol
DHX40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1
KO
K18711
ATP-dependent RNA helicase DHX40 [EC:
5.6.2.6
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cabi03019
]
116827413 (DHX40)
Enzymes [BR:
cabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116827413 (DHX40)
Messenger RNA biogenesis [BR:
cabi03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
116827413 (DHX40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
AAA_22
DEAD
HA2_C
HA2_N
DUF4685
AAA_19
Flavi_DEAD
AAA_30
AAA_16
T2SSE
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
116827413
NCBI-ProteinID:
XP_032640833
Ensembl:
ENSCABG00000008273
LinkDB
All DBs
Position
Unknown
AA seq
810 aa
AA seq
DB search
MERKGSCRKEKDKGNSDFRALPIHRYRKKLVEAVRENSFLIVTGETGSGKTTQLPKYLFE
EGFAKHGVIGVTQPRRVATMSAAQRVAEEMNSSLGSRVGYQVRFEDYTSEGTAIKYMTDG
CLLRQILADLHLTKYSVIILDEAHERSLSTDILFGLLKKLFQQKKPLKRRKALKVVVMSA
TLEVDKLSEFFGGCAVVNIPGRNYPVQEIFCSLLGPKDAESSAYVTEAVKVTLDIHLNES
AGDILVFLTGQSEIERTCDLLFQRAESIDYCYDVQDCSVEGLLILPLYGSMPTDQQRRIF
LPPPPGIRKCVVSTNVAATSLTIDGIRYVVDSGFVKQLNHNPRVGLDILEVVPISKSEAM
QRAGRAGRTSSGKCYMIYSKEFWDQCMPDHMIPEIKRTSLTSVILTLKCLAVHDVIRFPY
LDHPEERHILEALKQLYQCDAIDRRGHVTRLGEFLVQFPLPPNLSCAVIKAASLDCEELL
LPIAAMLSVENVFIRPGDLQKQKEAELHHQELSLEAGGCNDFATLLNIFEQCKSSKSPAA
WCQKHWVHFRALKSAFSVEAQLQEITNKLKQLSDFPRERFDGSRNEILRRCLCTGYFTNV
ARRSAGRTFCTMDGHGSIVHLHPSSALHDQEPQPEWIIFHDVLVTSKMYVRIVCPIRYEW
VKDLLPKLHEIDVYELSSVAREEVTEEEITKWKNKTDLKRQHEKIKDDSAKKMEKRNDDK
SIQDARVRYLQRKQQRARCINTTLKEMCYYSDEYSRKGTQCNCLLIRLQYNHTKKEKKVR
TEGSCQFMWSLSAWGHKPDTPCCLFFFDRQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaaaggcagttgccgaaaggaaaaagacaaaggaaactccgacttcagagcc
ctccctattcacagatacaggaagaaactagttgaggctgtgagagagaattcatttctt
attgtgactggagagacagggagtggcaaaactacccagctccctaaatatctatttgaa
gaaggctttgcaaagcatggagtgattggtgtgactcagccacgccgggtagctaccatg
tcagcggctcagagagtggctgaggagatgaactcttcactaggaagcagagtgggatat
caggttcgctttgaggactacacctctgagggtactgcaatcaagtatatgactgatggc
tgcttactgagacagatactggcagatctccatcttaccaaatacagtgtcattatactg
gatgaagcccatgagcggagcttaagcacagacattttatttggcttgctgaagaaactg
tttcaacaaaagaagcctctcaagagaaggaaagccctgaaggtggtggtgatgtcagcc
accctggaggtagacaagctctcagagttctttggaggctgcgcagtggtgaacattcca
ggaaggaattatcccgtccaggagatattctgcagcctgcttggtccaaaggatgcagaa
agctctgcttatgttacagaggctgtaaaagtgaccctggatatccacttgaatgagtca
gcaggagacatcttggtttttctgactggacagtctgagatagaaagaacgtgcgactta
cttttccagagagcggaatctattgattactgctatgatgttcaagattgttctgttgaa
ggtttgcttatcttaccgttgtatgggtcaatgccaacagatcagcagagaagaatattt
ttgccgccacctccaggcattagaaaatgtgtggtatccacaaacgttgctgcaacatct
ctgaccattgatggaatcaggtatgtagttgatagtggattcgtgaagcagttaaatcat
aaccccagggttggcttggacatactggaggtggttcccatttcaaagagtgaagcaatg
caacgagcaggccgagctggcaggacgtcatctggaaaatgctacatgatatacagcaag
gaattctgggatcagtgtatgcctgatcacatgatcccagagattaagagaactagtctt
acgtctgtgatcttgaccttgaagtgccttgctgtacatgatgtcataaggttcccctat
ttggaccaccccgaagagaggcatattttagaggctcttaagcaactttaccagtgtgac
gctattgacaggagaggccatgtgacaagactgggagagtttttggtgcaatttcctctc
cctccaaacctgagctgtgctgtcataaaggcagcttctctcgactgcgaagagctattg
cttcccatagctgcaatgttgtctgtggaaaatgtcttcatacgacctggtgaccttcag
aaacaaaaggaagcagaactccaccaccaggaactctcattagaggcaggaggatgcaat
gattttgcaacccttttaaacatctttgaacagtgcaaatcaagcaagtctcctgcagct
tggtgccagaaacactgggtccatttcagagcgttaaaatctgcttttagtgtggaagca
caacttcaggaaataaccaataagcttaaacagctgtcagacttcccaagagagcgtttt
gatggctccagaaatgagatactcagaagatgtctatgcacggggtacttcaccaatgta
gccagaaggtccgcaggcaggacgttctgcacaatggacggacatggtagcatagtccat
cttcatccttcatcagcactccatgaccaggaacctcaacctgaatggatcatcttccat
gatgtcttggttacatctaaaatgtatgtgaggatagtgtgtcctattcgttatgagtgg
gtcaaagacttgttgcctaagttacatgaaattgatgtgtatgaactgagcagtgtggca
cgggaagaggtgaccgaggaggaaataaccaagtggaaaaacaagacagacctcaaacga
cagcatgaaaaaataaaagatgactctgcaaagaagatggagaaaaggaatgatgataaa
tcaatacaggatgcccgagtgcgttacctccagagaaaacagcaaagggcacggtgtata
aataccacgctgaaggagatgtgctattacagtgatgagtactctagaaaaggcactcag
tgcaattgcttgttgataagattgcagtataaccacaccaaaaaagaaaaaaaagtgaga
actgaaggaagctgccagttcatgtggagtctgtcagcttgggggcataaacctgatact
ccttgctgtttgtttttttttgacagacagtga
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integrated database retrieval system
