Caballeronia sp. NK8: NK8_15700
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Entry
NK8_15700 CDS
T09553
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cabk
Caballeronia sp. NK8
Pathway
cabk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cabk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NK8_15700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabk03400
]
NK8_15700
DNA repair and recombination proteins [BR:
cabk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NK8_15700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
DUF1045
DUF3284
Motif
Other DBs
NCBI-ProteinID:
BCQ23441
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All DBs
Position
1:complement(1641453..1642430)
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AA seq
325 aa
AA seq
DB search
MLGTLRAIPSDTAPQSHARQQRFEGAAMPHMIWKGAISFGLVHVPVQLYPATQSEKVGFN
LLDKRSMDPIGYKQINKSTGKEVTRENIVRGFEYEKGKYVVMSDAEIRAANPESTQTVDI
LAFVEAPEISFLSLDTPYYLAPDRKGEKVYALLRDALKDTGKVGIASVVLHNKQHLAALI
PVGPALALNTLRWGDEVRDFSEFKFPDEDTKKAGVTPKELGMAKRLIEDMSDSWDPAKYH
DTFRDDIMALVEKKVKDGKVAEVTKIDEGGEQKPSAEILDLSELLKRSLKTGGTAKRAGK
AAQAKDDDEAPARPARKTAARRKRA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcacgcttcgtgcgattccctccgataccgcgccgcaatcgcacgcgcgtcaa
caacgcttcgaaggtgccgcgatgccgcacatgatctggaaaggcgcgatcagcttcggg
ctggtccacgtgcccgtgcaactctatccggcgacgcagtcggagaaggtcggcttcaac
ctgctcgacaagcgctcgatggatccgatcggctacaagcagatcaacaagagcacggga
aaggaagtcacgcgcgagaacatcgtgcgcggcttcgagtacgagaagggcaagtacgtg
gtgatgtccgacgccgagattcgcgcggccaatcccgaatcgacgcagacggtcgacatt
ctcgctttcgtcgaggcgcccgaaatctcgttcctgtcgctcgacacgccttactacctc
gcaccggatcgcaagggcgagaaagtctatgcgctcctgcgcgacgcgctgaaggatacg
ggcaaggtcggcatcgcgagcgtcgtgttgcacaacaagcagcatctggcggcgctgatt
cccgtcggtcccgcgctcgcgctcaacaccttgcgctggggcgacgaagttcgcgacttc
agcgaattcaagtttcccgacgaggacacgaagaaggccggcgtcacgccgaaagaactg
ggaatggcgaagcgtcttatcgaagacatgagcgacagttgggaccccgccaagtatcac
gacaccttccgggacgacatcatggcgctcgtcgagaagaaggtgaaggatggcaaggtc
gccgaagtgacgaagatcgacgaaggcggcgagcagaagccgtccgccgagattctcgat
ctttcggaactgctcaagcgcagtctgaagacgggcggcacggcgaagcgcgcgggcaag
gccgcgcaggcgaaggacgacgacgaagcacccgcgcgtccggcacgcaagactgccgct
cgccgcaagcgcgcatga
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