KEGG   Caballeronia sp. NK8: NK8_45530
Entry
NK8_45530         CDS       T09553                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
cabk  Caballeronia sp. NK8
Brite
KEGG Orthology (KO) [BR:cabk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cabk02044]
    NK8_45530 (tssC)
Secretion system [BR:cabk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NK8_45530 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: BCQ26369
LinkDB
Position
3:270588..272090
AA seq 500 aa
MNDLSIQQQGSAAVLDAAPGLDDFSTLLQKEFKPKSERARDAVANAVRTLAEQALRETGV
ISGDVLATIEALIAQIDQTLTGQINLILHSEPFQQVESAWRGLHYLVNNTETDESLKIRV
LNISKADLHKTLKKYRGVAWDQSPLFKKLYEEEYGQFGGEPYGALVADYYFDHSGPDVDL
LTQIAKIAAAAHAPFIAGADPAALLMESWQELANPRDLTKIFQTPEHAAWRSLRDSEDSR
YIGLAMPRFLARAPYGAKSDPVEAFDFEEDTVGANSSKYAWANASYAMAANITRSFKTSG
WCSRIRGVESGGAVEGLPVHAFPTDDGGVDMKCPTEIAISDRREAELARNGFMPLVHKKN
SDFAAFIGAQSLHKPAEYEDPDATANANLAARLPYLFACCRFAHYLKCIVRDKLGSFKER
DDMERWLQNWILQYVDGDPTHSSEDTKARKPLADAQVIVEEVAGNPGYYTSKFFLRPHYQ
LEGLTVSLRLVSKLPTAKAA
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgaacgatctcagcatccagcaacagggcagcgccgccgtattggacgcggcgcccgga
ctcgacgacttctccacgctgctgcaaaaggaattcaagcccaagtccgagcgtgcccgc
gacgccgtggcgaacgcggtacgcacgctcgccgagcaggcattgcgcgagaccggcgtg
atttccggcgatgtcctcgcgaccatcgaggcgctgatcgcgcagatcgatcagacgctc
accgggcagatcaacctgatcctgcacagcgagccgttccagcaggtcgagagcgcgtgg
cgcggcctgcattacctcgtgaacaacacggagaccgacgagtcgctcaagatccgcgtg
ctgaacatctccaaggcggatctgcacaagacgctgaagaagtatcgcggcgtcgcgtgg
gatcagagcccgctcttcaagaagctctacgaggaagagtacggccagttcggcggcgag
ccgtacggcgcgctggtcgcggactactacttcgatcacagcggtccggatgtggacctg
ctcacgcagatcgcgaagatcgcggcggcggcgcacgcgccgttcatcgcgggcgcggac
ccggcggcgcttctgatggagtcgtggcaggagctcgccaatccgcgcgatctgaccaag
atcttccagacgcccgagcatgccgcgtggcgctcgctgcgcgattccgaggactcgcgc
tacatcggcctcgcgatgccgcgctttctcgcgcgcgcgccctacggcgcgaagtccgac
ccggtcgaggcgttcgacttcgaggaagacaccgtgggcgcgaacagcagcaagtacgcg
tgggcgaacgcatcgtatgcgatggcggcgaacatcacgcgctcgttcaagacatccggc
tggtgctcgcgcattcgcggcgtcgagtcgggcggggcggtcgagggtctgccggtgcat
gcgtttccgaccgacgacggcggcgtcgacatgaagtgcccgaccgagatcgcgatcagc
gaccggcgcgaggccgaactcgcccggaacggcttcatgccgctcgtgcacaagaagaac
tcggacttcgcggcattcatcggcgcgcagtcgctgcacaagcccgccgaatacgaagac
cccgacgccaccgccaacgcgaatctcgccgcgcgtctgccttatctgttcgcgtgctgc
cgcttcgcgcactacctgaagtgcatcgtgcgcgacaagctcggctccttcaaggaacgc
gacgacatggagcgctggctgcagaactggattctccagtacgtcgatggcgaccccacg
cattcctccgaagacaccaaggcgcgcaagccgctcgccgacgcgcaggtcatcgtggag
gaagtggcgggcaatccgggctactacacgtcgaagttcttcctgcgcccgcactaccag
ctcgaaggtctcacggtgtcgctgcggctcgtgtcgaaactgccgacggccaaggccgcc
tga

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