Caldithrix abyssi: Cabys_1046
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Entry
Cabys_1046 CDS
T04549
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
caby
Caldithrix abyssi
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_1046
01504 Antimicrobial resistance genes [BR:
caby01504
]
Cabys_1046
Transporters [BR:
caby02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cabys_1046
Antimicrobial resistance genes [BR:
caby01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Cabys_1046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
PYNP_C
ETRAMP
Motif
Other DBs
NCBI-ProteinID:
APF17795
UniProt:
H1XWN0
LinkDB
All DBs
Position
1240372..1241424
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AA seq
350 aa
AA seq
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MKMVKIKLFIVFILSTLIFLQSCNNKKDKAAEIKPVAVRVVKPQITTLQEKISYVGTIQA
YREVKIISRVPGTILSLPAAEGTRVKKGEVVARIYAPELEATVQRLQAEVDYWTRRYEAD
QRLEAENAIPPEQVAMSRRAYLSAKASLEGAQSNLDKTIERSPFDGEVLRWMVDPGQPVM
PGQPILILGDNNTEVQVEVIEEELKRGLQTGTPVVLHKKDGTSVQSAVREIAPLASGISR
TFIVRIAVPPSLRNEWRKGESVKLGFILKSVSNAVAVPIEAIADRDVKPHIFLVRDDKAY
RQDVRPGIQQGNLVQVDFPYNGQDLVVVTNLELLSDGIPVFTVQTGEAGK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggttaaaataaaactctttatcgtatttatcctttcaacactcatttttttg
cagagttgtaataataaaaaggataaggcggctgagatcaaacccgtggccgtgcgtgtg
gtaaagccgcaaataaccacgttgcaggaaaaaatatcctacgtcggcacaattcaggcc
tatcgggaagtgaaaattatttcccgcgtgccgggcaccattctttccttgccagcggca
gaaggaacccgcgttaaaaaaggagaggtcgtggcccgtatttacgcgccggaactggaa
gccactgtgcaacgcctgcaggcagaggtggattactggacacgccgctacgaagcagac
cagcgcctggaagcggaaaatgccattccccccgagcaggtagccatgtctcgacgggcc
tatttgagcgccaaagcatcgcttgagggcgcgcagtctaaccttgataagacgatcgaa
aggtcgccctttgatggagaagtattaagatggatggtcgatcccggtcaaccggtgatg
cccggtcaaccaatcctgattttaggcgacaacaacacggaagttcaggtggaagttatt
gaagaagaattaaaacgcggtttgcaaacaggaaccccggtcgtactgcacaaaaaagac
ggaacttcggtgcaatccgcggtgcgagagatcgcccccctagccagtggaatatccaga
acatttatcgtcaggattgccgttcctccatctttacgcaacgaatggcgcaagggagaa
tcggtaaaactgggttttattcttaaatctgtttccaatgccgttgccgtacccatcgaa
gccattgccgaccgcgatgtaaaaccgcatatttttctggttcgtgatgacaaagcctac
cggcaggacgtgcggcctggcattcagcagggcaacctggtgcaggtggattttccatac
aacggtcaggatctggtggtcgtaaccaatcttgaacttctttcagacggaattccggta
tttaccgtgcaaacaggggaggcaggcaaatga
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