Cutibacterium acnes KCOM 1861 (= ChDC B594): RN83_07320
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Entry
RN83_07320 CDS
T04624
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
cacn
Cutibacterium acnes KCOM 1861 (= ChDC B594)
Brite
KEGG Orthology (KO) [BR:
cacn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cacn03019
]
RN83_07320
Enzymes [BR:
cacn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RN83_07320
Messenger RNA biogenesis [BR:
cacn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RN83_07320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
AAA_22
DUF5701
MTR4-like_stalk
Motif
Other DBs
NCBI-ProteinID:
ALD69898
LinkDB
All DBs
Position
complement(1575423..1578176)
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AA seq
917 aa
AA seq
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MSETLDRFIAGLSFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLK
CFYTTPIKALSNQKFHDLVARHGEDQVGLLTGDVTINSEAPVIVMTTEVLRNMIYGNSHT
LDTLGWVVLDEVHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEVRGD
VRVVVSERRPVPLVQHVAVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGR
SGKGKHSVSYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKANLLPAIIFVFSR
SGCDAAVSQLLNTDLVLTSQQEARQLRRIAQRHGEGLTDEERRAVGWNHFMAAFERGIAA
HHAGLLPVIKVIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITP
GEYTQLTGRAGRRGIDTQGYAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLV
GSMGREKARDLLEHSFAQFQIDRRLGGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLR
ENIRELEHEQARLRKGELPSQVADSLSSLDPGDIIAVPSGRHARWVVVVDPGTHGARGQR
PRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPENQADRRCLGKAFDRVLEGLGR
PVVKPRRAAVDAELSDQIAELRSQMKAHPCHSCPDRESHARFAERAMRLRRRSERELTKA
RAKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSELDLVTAEAIRRGVFDG
LDCPQLAAVLSTIVHESRPGDRGHLHRMPDGKSEAAESQLRAVRAEIGLLERDHRIERPR
DLDIGFAEASYAWAAGAGLDTVLDDMSAGDFVRRVRQVCDLAGQIAHAGVGENLAHTCRQ
VVGAMQRGVVTMDREED
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagactctcgatcggttcatcgccgggctgtcctttgaacctgacgactaccag
gtaaaggcctgccaagatctcgacgacggcgcgggtgttctagtggccgctcctactgga
gctggcaagaccgtggtgggggagtatgccactgatttagctctggcatcggggctgaag
tgcttttacaccacacccattaaggcgctgtccaatcaaaagttccatgaccttgtcgcc
cgacacggtgaagaccaagtaggccttctcaccggtgacgtcactatcaactccgaggca
ccagtcatcgtcatgacgactgaggtattgcgcaatatgatctacggcaattcccatact
ctcgacactttggggtgggtggtgctggatgaggtgcactacctcgcggaccgtttccgc
ggcccggtgtgggaagaggtcatccttggactcgatccgcgcgtcaagatcgttggtctt
tcggcaaccgtctctaatgccgaggaatttggagagtggctcgacgaggtgcgtggcgac
gtcagggtcgtcgtgtccgagcgtcgcccggtaccgcttgtccaacacgtagcggtggcg
cgacgtctttatgaactcttcgattcgcgccgtcctacggaggtcaaccccgaactaacc
tccattgccaaggaggaggcccggttccagcgtgatgactcccgtcgtccgcgaggaagg
tctggcaaggggaaacacagtgtgtcttatggaactggccgattcggtggggcctcggca
cagcgtcgggggcgtggcggtcggcctcgtggccctcgcaaccagccgagccgtatccag
gtggtgcgttccctccacaaggccaacctcttgccggccatcatcttcgtgttctcccgg
agcgggtgtgacgctgctgtcagccagctgcttaacaccgacctggtgctcactagccag
caggaagcccgtcagttgcgtcgcatcgctcaacgccatggggaaggattgactgacgag
gaacgccgcgcggttggctggaatcacttcatggcagccttcgaacgtggcattgctgct
caccatgccggtctgctcccggtgatcaaagtgatcgttgaggaggggttcgtcgcggga
ttactcaaggtcgtcgtcgctaccgagaccctcgctctgggcatcaatatgccagctcgt
accgtcgtgctggaaaaactcgtcaaatacaatggccagactcacgctgacatcaccccc
ggggaatacacccagctcaccggacgcgccggacgccgtgggatcgacacccaggggtac
gccgtcgtctgctggcaaccaggtatggatccgcgtgcggtggccggactggcctcgcgt
cgtacgtacccgctcaattcggcctttgtgccgacatacaacatggccgtcaacctcgtt
ggatcgatggggcgggaaaaagctcgtgacctactggagcattccttcgcacagttccaa
atcgatcgcagattgggaggctcggcagttcgcaaccggcaaacccaggccgacatcgag
gcctacctcaaggcggcccattgcgaaaggggagatttcaccgtatacgcccggttgcgg
gaaaacattagggagctggaacatgagcaggcgaggttgcgcaaaggtgaacttcctagc
caggttgccgactcactgtcgagtcttgatcctggggacatcatcgccgtgccatctggg
cgtcacgctcggtgggtcgttgtcgttgaccctggcacccacggcgcgagaggtcaacgg
cctcgcccccttgtcatgaccccggatcggacagtgattcgtctggggcatcaggatatt
gacgcccccgttacccgagtagccggcgtgaaagtcccgcgccatttccaccccgaaaac
caggccgatcgtcgctgcctcggcaaggccttcgatcgggtacttgaggggctggggagg
ccagtggtgaagccgcgtcgtgctgcggtggatgctgagctttccgaccagatcgccgag
ctgcgctcccagatgaaggctcatccctgccactcctgccccgatcgcgagtcccatgcg
cgtttcgctgaacgtgccatgagacttcgccgtcgcagtgagagggaattgacgaaagca
cgcgcgaaggcgacgtcgattgccacccagtttgagcgaattgtgctggtactggaggct
ttgggatacctcggtacgggtggggatactgtcacggacgctggccggatgctttcgggg
atctattccgaactcgacttggtgacggctgaggcaattcggcgaggcgtctttgacggc
ctggattgcccgcagttggcggcggtgttgtcgaccatcgttcacgagtcgcggccgggg
gaccggggccaccttcatcgcatgcccgatgggaagagcgaagcggcggagtcccaactg
cgtgcggtccgagccgaaattggtctgctcgagcgtgaccaccgcattgagcgtccccga
gatctcgacattggttttgccgaggccagctatgcatgggctgccggtgccggtctggac
accgtactcgacgacatgagtgctggtgattttgtgcgccgggtgcgtcaggtgtgcgat
ctagctggacagattgcccatgccggggttggggagaatctggcccacacttgtcgtcaa
gtggtgggtgccatgcagcgtggggttgtcaccatggaccgcgaagaagactga
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