Corynebacterium afermentans subsp. lipophilum: CAFEL_02995
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Entry
CAFEL_02995 CDS
T09361
Symbol
pcaR
Name
(GenBank) Pca regulon regulatory protein
KO
K02624
IclR family transcriptional regulator, pca regulon regulatory protein
Organism
cafe
Corynebacterium afermentans subsp. lipophilum
Brite
KEGG Orthology (KO) [BR:
cafe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cafe03000
]
CAFEL_02995 (pcaR)
Transcription factors [BR:
cafe03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CAFEL_02995 (pcaR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
HTH_24
HTH_23
MarR_2
HTH_Crp_2
HTH_29
TrmB
Sigma70_r4
Rrf2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WJY58383
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Position
630760..631545
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AA seq
261 aa
AA seq
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MSGSDVQLVQSLTRGLAVIRAFSGARPRQTLAQVAESTGLPRATVRRFLHTLVAEGYASS
DGTVFWLTPKTLELGFSYLSSLGLPAIAQPHLDGLSRTLNESSSLTVLDGSDVVYVARAA
ADRIMSVNITIGTRFPAYATSMGRVLLADLPSAQLDAYLAGTALEPITPETVTSEDAFRQ
LLIDVQRQGYAIVDQELELGLRSVACPVRGNDGKVVAAVNLSAHAGAVGHREVVDRLLPP
LQATASAIERDLQTTTLKEES
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtagtgatgtgcaactcgtacagagcctcactcggggcctggcggtcatccgc
gcgttcagcggtgcccgcccgcgccaaacgcttgcccaggtcgcagaatccacgggcctt
ccgcgcgcgacggtgcgccggtttttgcacacgctcgttgcggaggggtacgcctccagc
gacggcacggttttctggctcaccccgaagactctcgagctgggcttttcgtacctgtcc
agcctggggcttccggcgatcgcgcagccgcatttggatggtctgtcgcgcacgctcaac
gaatcgagctcgctcaccgtcctcgacggctccgacgtcgtctacgtcgcccgcgccgcc
gcggaccgcatcatgagcgtcaacatcaccattggcacgcgctttcccgcttacgcgacg
tcgatgggccgcgtgctgctcgccgatctcccatccgcgcagctcgacgcctaccttgcc
ggaaccgcactcgagcccatcacccctgagacggtcaccagcgaggatgcgttcaggcaa
ttgcttatcgacgtccaaaggcagggctacgccatcgtcgaccaagaactcgagctgggt
ctgcgttccgtggcgtgcccggtccgcggcaacgacggcaaggtcgtggccgcggtgaat
ctgtcggcccatgctggggcggtggggcaccgggaggtcgtcgataggctgctgcccccg
ctgcaggcaacggcgagcgcgatcgagcgtgacctgcaaacaaccactctgaaggaggaa
tcatga
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