Candidatus Contubernalis alkalaceticus: HUE98_15680
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Entry
HUE98_15680 CDS
T07972
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
calk
Candidatus Contubernalis alkalaceticus
Pathway
calk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
calk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HUE98_15680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calk03400
]
HUE98_15680
DNA repair and recombination proteins [BR:
calk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HUE98_15680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
UNC93391
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All DBs
Position
complement(3149657..3150514)
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AA seq
285 aa
AA seq
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MRTIWKGAISFGLVSIPVKLFPATERKEVKFKFLHNKCKSPIKNNRVCSSCQQEVGWDEI
IKGYEFETGKYVVFDSEELERFPQGRSKTVDIVDFVNLEEIDPVYFDKTYYMAPGETGEK
PYVLLRNIMEETGKIAIARVVIRTRENLAAIRVHNGILTMETMFYPDEVRNTDLVPVEGR
GITIHENELKMAQQLVENLASSFDPEKYFDEYRERVLQIIEAKVAGQKIEVPEAPEKAKI
VDLMEALRASVQMTEGKEEERAGLKKDKKKKPPQGRKKKEKAGIG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaatttggaagggagctatcagttttgggctggtcagcataccggtaaaactt
tttccggcaacggagaggaaagaagtaaaattcaagtttctgcacaacaaatgtaaaagt
cctattaaaaataatagagtatgttcttcctgtcagcaggaggttggatgggatgaaatt
atcaaaggttatgagtttgaaacgggaaaatatgtagtttttgattctgaggaactggag
cggtttccccagggtagatcaaaaacggtggacattgtggattttgtaaacttagaggag
attgacccggtttattttgataaaacatattatatggctcccggtgaaaccggagaaaag
ccttatgtcctgcttagaaacattatggaggaaaccgggaaaattgccatcgcacgggtg
gtcatccggacccgggaaaatctggcagccattcgggttcataacgggattcttaccatg
gaaacgatgttttaccctgacgaagtaaggaacactgacctggttcctgtggaaggccgg
ggaattactattcatgaaaatgagctgaaaatggctcagcagctggtggaaaatctggcc
tcatcctttgacccagagaaatactttgatgagtatcgggaaagagtgctgcaaattatt
gaggccaaagtagcggggcagaagatagaggttcccgaagcgccggaaaaagccaagatt
gtcgatttgatggaggctttgagggccagtgtgcagatgacggagggtaaagaggaagag
agggcaggactaaaaaaggataaaaagaaaaaaccaccccaggggcggaagaaaaaagag
aaagcagggattggctag
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