Cicer arietinum (chickpea): 101488528
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Entry
101488528 CDS
T02819
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101488528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cam03400
]
101488528
Enzymes [BR:
cam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101488528
DNA repair and recombination proteins [BR:
cam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101488528
FA (Fanconi anemia) pathway
Downstream FA components
101488528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Pex19
Yippee-Mis18
Tax
Motif
Other DBs
NCBI-GeneID:
101488528
NCBI-ProteinID:
XP_004499955
UniProt:
A0A1S2Y647
LinkDB
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Position
Ca5:18716617..18741617
Genome browser
AA seq
1203 aa
AA seq
DB search
MFFSAKNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLNQAQREGHCHALLESPTGTG
KSLSLLCSSLAWQHHFKPPPEPITDPLAASDGGFLPDEVSASENPDATIKKQKKNAAPTI
YYATRTHSQISQVVRELQKTSYRVPMAVLASRKHYCTNKNIRSKENIDEECKLLLKDQAI
GCPEFKNAHKVKVHRSLQKGGCNEVHDIEDLVKVGKSVKGCSYYAARSMSDDAQLVFCPY
NYIINPVIRGAMDVDIKGAIVIFDEAHNIEDISRDAGSVDIEEDVLDKLQMELQQLCPSN
TAVYQPLYELTLGLTSWMEQKKTKLEKRDFQHYVSCWTGDKALQELEEANISKQCFPILI
ECATKAIKIATDLETEAPRLSGMSVITLEGLFSSLSYFFSKNGSHMLDYQLALQRSVRKH
DRRAFGNWTHTLSLWCLNPEVVFRDVADLSLSVILTSGTLSPMTSFSSELGVKFETSLEA
PHVIDVDSQVWPAIISTGPGNYPLNASYKTADGYAFQDAVGRSLEEIFKIVSGGCLVFFP
SYKLMEKLCNRWSETGQWSRLNAEKSLFVEPKGGSQDDFELALKGYYDAIHHDKRPASGR
KRRIKKTDLNHFHAVDSLQDSKKGGAALLGVCRGKVSEGIDFSDDNARLVIIVGIPFPNI
NDIQVSLKKKYNDTFKSSKQLLGGNEWYCHQAFRALNQAAGRCIRHRLDYGAIILLDERF
CEERNKALISKWLRRPLKVYDSFDLSLEGLKLFFKNAQERYCRNTVHATQNLDLNGDGVQ
NKDENMRFTRKKSQKLNKSSCGGEKETSVIEDNIAIPIPNSCSLAESQPSGQRSSNTYNF
KDHINIQCCNLTERFTGALSVTITHEETSIVKESPCLDIGNDAASSDYSKDDNSDSTIIE
ASAQFAMDRLSSFPVSSTTGSKTSITVTPEKNVTEKNVPETESSLNLSVNSHSQKRKKPM
VVPFINHIEETHGTECGLGRILNSQSSQLPTSNLPGSCSSPAPVLSKRLQLFCSLCKNPL
GLHENQLYLTCSLISSSKVHLRFLLKKRLETYTADTAKSVPVIVTESSFVDQRICNRISK
NTPDQGIWCPEDGCVFSTIFCPFCSNSKNLLGVQVMATSSSNVQLLDKILFFSDSLEVKN
HEETGKIASKEVGFSPILDSGMDGVAALNSFEKYSYLPQPGKSEGWKSRKSKSRLRGLPY
AEI
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccgcaaaaaaccctaaaaatgtgtaccacatcggaggtctgcaagtcgaa
tttccttaccaaccgtacgggtcacagtttgcatttatgggtcgagtaatctccactctt
aaccaagctcagagagaaggacattgtcacgcgttgctcgagtctccaactggtactggc
aaatccctttcgcttctttgttcctctctcgcttggcagcaccattttaaaccccctccg
gagccaataaccgatcctctcgcggcctccgatggaggatttcttccagacgaggtttca
gcatcagaaaatccagatgccaccatcaagaagcagaagaaaaatgcagctccaactatt
tactatgcaacgagaacgcactcacaaatttctcaagtggttcgtgaattgcagaaaacg
tcatacagggtgccgatggctgttttggcatcacggaaacattactgcaccaataaaaat
atacgcagcaaagagaacattgacgaagaatgtaaactactactgaaagatcaggcaata
ggatgtccagagttcaaaaatgcacataaagtcaaagttcaccgatcccttcaaaaagga
ggatgcaatgaggtgcatgacatagaagatcttgtaaaagttggaaaatcggtgaaaggt
tgctcttattatgctgcccgttctatgtcagatgatgcacagttggtattttgtccatat
aactacataattaatccagtcattcggggagcaatggatgtagatattaaaggagccatc
gtgatatttgatgaagctcacaatatagaggacattagtcgtgatgctggtagtgtggat
attgaagaggatgttttggacaaactacagatggagctccagcaactctgtccttcaaat
actgcagtttaccagcccctatatgaattgacactgggccttactagttggatggaacag
aagaaaactaaactagaaaaacgtgactttcagcactatgtgtcatgttggacaggtgat
aaggctttacaagagcttgaagaagcaaatatttcaaagcagtgcttccctatcttgata
gaatgtgctactaaggcaatcaaaattgctacagacttggaaacggaagcaccacgttta
agtggcatgtcagtgataacattggaaggcttattctcatcactatcttatttcttctca
aaaaatggatctcacatgttggattaccagcttgcccttcagcgaagtgttagaaaacat
gatagaagagcttttggaaactggacacatactttaagtctgtggtgcttgaatccagaa
gttgtatttagagatgttgccgatctttctttatcagtcatattgacttctgggacactg
tcaccaatgacatcattttcttctgaacttggagttaagtttgaaactagtcttgaagct
ccacatgtaattgacgttgattcacaggtgtggcctgctataatctccactggtcctggt
aattatcctttgaatgcaagttacaaaacagcagatggatatgcgttccaggatgcagtt
ggaagatctttagaggaaatcttcaagattgtttcaggtggatgtcttgtgttctttcca
agttataaattgatggaaaaactatgcaacagatggtctgaaacaggtcaatggtctcga
ctcaatgcagagaagtccctttttgttgaaccgaaggggggaagccaagatgattttgaa
cttgcattgaagggttattatgacgcaattcatcatgacaaaagacctgcttctggaagg
aaaagaaggattaagaaaactgatctaaatcacttccatgcagttgactccctacaggat
tctaagaaaggaggagcagctttacttggtgtttgtcggggaaaggtttctgaaggaatt
gatttctccgatgataatgctagactagttattattgttggtatcccgtttccaaacata
aatgatattcaagtttcactaaagaagaagtataatgacacattcaaatcatccaaacaa
ctcttaggcggaaatgagtggtactgccaccaagcgttccgagctttaaatcaagcagca
gggcgctgtatacggcatagacttgattatggagcaatcatcctattggatgaacgcttt
tgtgaagaaaggaataaagcattaatttcaaagtggttaagaagacccttgaaagtgtac
gacagttttgatttgtcactggaaggactaaagttgttctttaagaatgcccaggagcgg
tattgcaggaatacagtgcatgccacacagaatttggacttaaatggtgatggagtccaa
aacaaggatgaaaatatgaggttcacaagaaagaaaagtcagaaactgaacaagtctagc
tgtggaggtgagaaagaaacctcagttattgaggataacattgccattcccataccaaac
tcttgcagtcttgctgaaagtcagccatcaggtcaaaggagtagtaacacatataatttc
aaagaccatatcaacatacaatgctgtaatctgacagaaaggttcactggggcattgtct
gtgacaattacacatgaagaaacctccatagtcaaggaaagcccgtgtttagatattggc
aatgatgctgccagctccgattactctaaggatgacaattctgattccaccataattgag
gcttctgctcaatttgcaatggatcgcttgtcaagttttccagtgtcttcaactactgga
agtaaaacatcaataacagtcactcctgaaaagaatgtaactgaaaaaaatgttccagaa
acagaatcatctttgaatttgagtgttaattctcatagtcaaaaaaggaaaaagcccatg
gtcgtaccatttataaaccacattgaagaaactcatggaactgaatgtggtcttgggaga
attttgaactcacaatcttctcagttaccaacgagcaatttacctggttcatgttcatca
cctgcccctgtactaagcaaaaggttacagctgttttgttcactctgcaaaaacccattg
ggactacatgagaaccagctatatcttacatgctctttaatttcatcatcaaaagttcac
ttgagattccttttgaaaaagagactggaaacttacaccgctgatacagcaaagagtgta
ccagttattgttacagaatcttcatttgttgatcaacgtatttgcaatagaatatctaaa
aatacaccggatcagggtatatggtgtccagaagatgggtgtgttttcagcacaattttt
tgtcccttttgcagtaattccaaaaatttgctcggtgttcaggtcatggcaaccagttca
tcaaatgttcagttactcgacaagatattgtttttctctgattctttggaagtgaaaaac
cacgaggaaacaggaaaaattgcttcaaaggaagtgggtttttccccaattctcgactct
ggtatggatggagttgctgccttaaattcctttgagaaatattcttatcttccccagcct
gggaagtcagaaggctggaagtctagaaaatcaaagtcaagactaagaggcttgccttat
gcagaaatttga
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