Cicer arietinum (chickpea): 101492204
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Entry
101492204 CDS
T02819
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101492204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101492204
Enzymes [BR:
cam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
101492204
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
101492204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
CbiA
AAA_22
SRPRB
ABC_tran
ATP_bind_1
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-GeneID:
101492204
NCBI-ProteinID:
XP_012570279
UniProt:
A0A1S3E4H1
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Position
Ca4:complement(18430924..18435555)
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AA seq
439 aa
AA seq
DB search
MAYGGGAAPVGGSNLTPVIKQVKLEKECELRIEVGNDAPLRLRLLNGTAEIFGTELPPEI
WLNFPPRLKFAVFTWYGATIEMDGNTETDYTADETPMISYVNVHAILEGRRSRTKALPSD
DSILSQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATP
IEMPIDPVEGIPLEMPLVYFYGHTTPSNNVELYKVNVKELAGMLERQFAGNAESRAAGMV
INTMGWIEGVGYDLLLHAIRTFKANVVLVLGQEKLCSMLRDVLKGEPKVDVVKLQRSGGV
VSRNAKVRQKARSYRIREYFYGLANDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAE
PAADPTRVVPVNINRDLLHVVLAVSFAKEPDEIISSNIAGFIYVTDIDILRKKITYLAPS
AGELPSKYLIMGSLTWLET
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatggtggtggtgcagctcctgttggtggttcgaatttgacaccggtaattaag
caagtcaaattggaaaaggaatgcgaactgagaattgaagtcggtaacgacgcgcctctt
cgccttcgtctcctcaatggcactgctgagattttcggcactgaacttccccctgaaatc
tggctcaattttcctcctagactcaagtttgctgtctttacttggtatggtgcgaccatt
gaaatggatggtaatactgaaactgattatactgcggatgagacaccaatgattagttat
gttaatgtgcatgctatattagaaggaagaagaagtcgcaccaaggctttaccatcagat
gactctatattgtctcagggccctagggtgattgttgtaggacctacagattctggaaag
agtacgctgtcaaggatgcttcttagttgggcagctaaacaaggttggaaacccaccttt
gttgacttggatattggccaaggatctataacaattcctggatgcattgctgctactcca
attgaaatgcccatcgatcctgtggagggaattcctctagaaatgcctctcgtttatttt
tatggacacactactccgagtaataatgtagaattgtataaagtgaatgtcaaggagctt
gcggggatgctggagagacaatttgctggaaatgctgaatctcgagctgcaggaatggtg
ataaataccatgggatggatagagggagtaggctatgatttgctattgcatgcaatccgt
acattcaaagcaaatgttgtcttggtattgggtcaggaaaaactgtgcagcatgctcaga
gatgtgcttaagggtgagcctaaagtagatgtagtgaaacttcagaggtcaggtggagtt
gtatctaggaatgcgaaggtccgccagaaggccagaagttataggataagggaatacttt
tatggccttgcaaacgatctttctcctcattctaatattgcaaattttagtgacttgttt
gtttatcgagttggtggcgggccacaagccccacgctctgccttgccaattggagcagaa
cctgctgcagatccaacaagagttgtacctgtgaatataaatcgtgatttgctacatgta
gtccttgctgtctcatttgccaaggaacctgatgagatcatttcaagcaatattgctggc
tttatctatgtaaccgacattgacattctgagaaagaagataacttaccttgcaccatct
gctggagaacttccaagcaagtatttaattatgggatccttaacatggcttgagacatga
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