Cicer arietinum (chickpea): 6797471
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Entry
6797471 CDS
T02819
Symbol
rpoB, CiarC_p019
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
6797471 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
6797471 (rpoB)
03400 DNA repair and recombination proteins [BR:
cam03400
]
6797471 (rpoB)
Enzymes [BR:
cam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
6797471 (rpoB)
Transcription machinery [BR:
cam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
6797471 (rpoB)
DNA repair and recombination proteins [BR:
cam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
6797471 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-GeneID:
6797471
NCBI-ProteinID:
YP_002149733
UniProt:
B5LMM4
LinkDB
All DBs
Position
Pltd:34162..37374
Genome browser
AA seq
1070 aa
AA seq
DB search
MLGVGNEGMSTLPGLNQIQFEGFSRFIDRGLTEELLKFPKIEDTDQEIEFQLFVETYQLV
EPAIKEKDAVYESLTYSSELYISAGLIWKNSRDIQEQIIFIGNIPLMNSLGTSIVNGIYR
IVINQILQSPGIYYRSELDHNGISVYTATIISDWGGRLELEIDRKARIWARVSRKQKISI
LVLSSAMGSNLSEILENVCYPEIFLSFLNEKEEKKIGSKENAILEFYRQFACVGGDPIFP
ESLCTELQKKFFQQRCELGGIGRRNMNRRLNLDIPQNNTFLLPRDILTAADHLIGMKFGM
GTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENIIRGTISGALRYKLIPTPQNLVTSTP
LTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGHWGSIESPFYEISDRSKRIQMLYLSPSRDEYYMVA
TGNFLALNRGIQEEQIVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSRSEKCIVGTGLERQVALDSGVPAIAEHEGKIIYNDTDKIILYGN
GNALSIPLIIYQRSNKNTCMHQKSQVQKGKCVKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNSEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSHGPERITNKIPHLEAHLLRNL
DKNGIVILGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSPSKETCLKLPVG
GRGRVIDVRWIHKKAGSSYNPETIHIYISQKREIKVGDKVAGRHGNKGIVSKILSRQDMP
YLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSMLNRHYRIAPFDERYEQEASRKLV
FSELYEASKQTSNPWIFEPEYPGKSGIFDGRTGNRFEQAVIIGKPYILKLIHQVDDKIHG
RSSGHYALVTQQPLKGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVL
GTTIIGGTIPKPVDAPESFRLLVRELRSLALELNHFLVSEKDFQIQRKEV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcgttgggaatgaaggaatgtctacactacccggattgaatcaaatacaattt
gaagggttttctagattcattgatcggggcttaacagaagaacttttaaagtttccaaaa
atagaagataccgatcaagaaattgaatttcagttatttgtggaaacatatcaattggta
gaacccgcgataaaagaaaaagatgctgtatatgaatcacttacatattcctctgaatta
tatatatccgcgggattaatttggaaaaacagtagggatatccaagaacaaattattttt
attggaaacattcccctaatgaattccctgggaacttctatagtaaatggaatatacaga
atagtaatcaatcaaatattacaaagccctggtatctattatcggtcagaattggaccat
aacggaatttcggtatatactgccacaataatatcagattggggagggagattagagtta
gagattgatagaaaagcaaggatatgggctcgtgtaagtagaaaacagaaaatatctatt
ctagttctatcatcagctatgggttcgaatttaagcgaaattcttgagaacgtttgctac
cctgaaattttcttgtcttttctcaatgaaaaggaggaaaaaaaaatagggtcaaaagaa
aatgccattttggagttttatcgacaatttgcttgtgtagggggagatcccatatttcct
gaatctttatgtacggaattacaaaaaaaattttttcaacaaaggtgtgaattaggaggg
attggtcgacgcaatatgaaccgaaggctgaatcttgatatacctcaaaacaatacattt
ttgttaccgcgagatatattgacagctgccgatcatttgattggaatgaaatttggaatg
ggtacacttgatgatatgaatcatttgaaaaataaacgtattcgttccgtagcagatctc
ttacaagatcaatttggattggctctcgttcgtttagaaaatataattagaggaactata
agtggagcacttagatataaattgataccgactcctcagaatttggtgacttcaactcca
ttaacaaccacttatgaatctttttttggattacacccattatctcaagttttggatcga
accaatccattgacgcaaatagttcatggaagaaagttgagttatttgggtcctggagga
ttgacggggcgaactgctagttttcggatacgagatattcatcctagtcactatggacgc
atttgcccaattgacacctctgaaggaatcaatgtaggacttattggatctttggcaatt
cacgcaaggattggtcattggggatctatagaaagtccattttatgaaatttctgacaga
tcaaaaagaatacaaatgctttatttatcaccaagtagagatgaatactatatggtagcg
acggggaattttttagcactgaatcgaggtattcaggaggaacagattgttccagctcga
taccgtcaagaatttcttactattgcatgggaacaagttcatcttcgaagtatttttccc
tttcaatatttttctattggagcttccctcattccttttatcgagcataatgatgcgaat
cgcgctttaatgagttcgaatatgcaacgtcaagcagttcctctttctcggtccgaaaag
tgcattgttggaactggattagaacgccaagtcgcgttagattcaggagttcccgctata
gccgaacacgagggaaagatcatttataacgatactgacaagatcattttatatggaaat
gggaatgctctaagcattccattaattatatatcaacgttccaacaaaaatacttgcatg
catcaaaaatcccaggttcagaaaggtaaatgcgtaaaaaagggacaaattttagccgac
ggtgctgctacagttggcggtgaactcgctttgggaaaaaacgtattagtagcttatatg
ccgtgggaaggttacaattctgaagatgctgtactcattagtgagcgtctggtctatgaa
gatatttatacttcttttcacataaggaaatatgaaattcagactcatgtcacaagccac
ggtcctgaaagaatcactaataaaattccacatctagaagcccatttactccgaaattta
gacaaaaatggaatagtgatcctgggatcttgggtagaaacgggagatattttagtgggt
aaattaacgcctcaaatggcgaaagaatcctcatatgccccggaagatagattattacga
gctatacttgggattcaggtatccccctcaaaggaaacttgtctaaaactacctgtaggt
ggtaggggccgagttattgatgtcagatggatccacaaaaaagcaggttctagctataat
ccagaaacgattcatatatatatttcacagaaacgtgaaatcaaagtaggtgataaagtg
gccgggagacacggaaataaaggtatcgtttcaaagattttgtcgagacaagatatgcct
tatttgcaagatggaagacccgttgatatggtctttaatccattaggggtaccctcacga
atgaatgtaggacagatatttgaatgttcactcgggttagctgggagtatgctaaataga
cattatcgaatagcaccttttgacgagagatatgaacaagaggcttcgcgaaaactagtg
ttttctgaattatatgaggccagtaaacaaacatcgaatccatggatatttgaacccgag
tatccgggaaaaagcggaatatttgatggaagaacagggaatcgttttgaacaagctgtt
ataataggaaagccttatatcttgaaattaattcatcaagttgatgataaaatacatgga
cgttccagtggacattatgcacttgttacacaacaaccccttaaaggaagggccaaacaa
ggaggacaacgggtaggcgaaatggaggtttgggctctcgagggattcggtgttgctcat
attttacaagagatgctgacttataaatctgatcatattaaagctcgtcaagaagtactc
gggactacgatcattggaggaacaatacctaaacccgtggatgctccagaatcttttcga
ttgctcgttcgagaactacgatctttggctctggaactgaatcatttccttgtatctgag
aaagacttccagattcaaaggaaggaagtttaa
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