Cyclobacterium amurskyense: CA2015_0926
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Entry
CA2015_0926 CDS
T03993
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
camu
Cyclobacterium amurskyense
Brite
KEGG Orthology (KO) [BR:
camu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
camu03400
]
CA2015_0926
DNA repair and recombination proteins [BR:
camu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CA2015_0926
Archaeal homologous recombinant proteins
CA2015_0926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_21
SMC_N
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKP50384
UniProt:
A0A0H4P883
LinkDB
All DBs
Position
1149666..1152704
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPLKLSIKGLYSYKEEQIIDFEKLTAAGMFGIFGAVGSGKSSILEAILLALYGSTERLS
DRGEKNSMVNLQSNHLLINFEFSAGKNNSQHFLARYSVKRNAKNFNEIKPAEHTFYLIEG
GETTPIQQNAEAIIGMKKEHFKQTVIIPQGKFREFIDLTPGPRAEMMKELFGLERFDLSA
KTGGLLKVVKNELIRLETQLEGLGDTSEEILKEKFKLREEFKEAGKKASENLDKTSLQLQ
SLEALKKKHLQFIDFQSKWDALQSRTQEMEEKKKELKAYTQANNYLRPIWNQIKDCQLEL
EKASTGIVNCNRFKEAYSDDIRKLELQERELREKAEKRPLREAKIRDLKKVLELQVIIKD
LEDAKNKVSSIKPSLIENQGKLAAIEKQLSSLEEELDNSRSQATSTQLAKLTGDIKDWSN
LSENKNNLELSLAQINKEIQSIKEREEEITSGIPSQFENLDSWYNWENEQLKSLEAGKEQ
LIENKALQAHVKSLKTGEPCPLCGSVHHPMPLSTDETEEKVAEFKQRLIASKQTIDKIQK
LSRQLYDQNLQKTNQVKLYTEKEQDLKTLNIEFSSLKNDLMADGLKDLDALKERFKKLKG
QIEKEESLQKSAREYRKQLESLRLQIENGQQQLKVGEQQTIELTSRLKAKEEEISDKNFS
NGYMQSSTETIKQTIATVLKDIEDTANLLDGKQKVLKDKRNDETTNLANLENFKNNKEEA
VLKLETLNSKYDELKTKLGQTDQKLLDKLFNSNLDEEKFDREIREYEKECSIVQSHLSSL
EAEEGVKNFDQAHFNLLQEEFDSKKAELDAINKKTINLDRDISELKEKLETKKDLAKLLD
AMENRATNLKELEQLFKGSGFVKYVSSIYLKELCNTANKRFTQLTKNSLRLEIDANNTFW
VVDYLNEGKKRLLKTLSGGQTFQASLCLALALAEKVKSLNQADQSFFFLDEGFGALDRKS
LRIVFETLKALRHENRIVGIISHVEELQQEIEVFANIVLDAEKGSQVMYSYQ
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattccattaaagctttcaattaaaggactgtactcctacaaggaagaacaaatcatt
gattttgaaaaacttactgctgcaggaatgtttgggattttcggagcagttggcagtggt
aaatcttccattttggaagcaatactattggcattgtatggcagtacagaaaggctttct
gacaggggggagaaaaacagcatggtcaaccttcagagcaatcatttactgatcaacttt
gaatttagtgctggcaaaaacaatagtcagcatttcctggccaggtattcggtaaagcga
aacgctaaaaatttcaatgaaatcaagcctgcagaacacacattttatctaatagaagga
ggagaaacaaccccaatacagcaaaatgccgaagctatcatcggcatgaaaaaggagcat
ttcaaacaaacggtaattatccctcaaggtaaattcagggaatttatagacctcactcct
ggtcccagggcagaaatgatgaaggaattgtttggcctagaacgttttgatttatcggcc
aaaacaggtggtttattgaaggtagtaaagaacgaactgattcgattagaaacacaattg
gaaggattaggtgatacttctgaggagattttaaaagagaaatttaaattaagagaggaa
ttcaaagaggcaggaaaaaaagcaagtgaaaacttagacaaaaccagtcttcagctacag
tcccttgaggccttgaaaaagaagcacctgcagttcatagattttcaatccaaatgggat
gctcttcaatctcgcacacaggagatggaagagaaaaagaaagagctaaaggcctatact
caagcaaacaactacctgcgcccaatatggaaccagataaaggattgtcaactggaattg
gaaaaagcctccacgggtatagtcaattgcaataggtttaaagaggcctattctgatgat
atccgcaaattagaacttcaggaaagagaactaagagaaaaagcagaaaaaagaccatta
agagaggccaagatccgagatctaaaaaaagtattggagcttcaggtcatcataaaagac
cttgaagacgcaaaaaacaaggtttcttcgattaagccaagccttattgaaaaccaggga
aaattagcagcaatagaaaaacagctctcttcacttgaagaagaactggataatagcaga
agccaggccacaagtacgcagctggcaaagctcaccggtgacattaaggattggagtaac
ctttcggaaaacaaaaacaaccttgagctgtccttagcccagatcaataaagaaattcag
tccataaaagagcgtgaagaagaaatcacctcaggaatccctagtcagtttgagaactta
gatagttggtacaattgggagaatgagcaactcaaatcattagaggcagggaaagaacaa
ttgattgagaacaaagcattgcaagcacatgtcaaaagtttaaagacaggtgaaccctgt
cctctttgtggttctgttcatcaccctatgccgcttagcacagacgaaactgaagaaaaa
gtagccgaattcaagcaacggcttatagcctcaaagcagactatcgataaaattcaaaaa
ctttcccgtcaactctacgatcaaaacttacaaaaaacaaatcaagtcaaactttacact
gagaaggaacaggatttaaaaactttaaatattgaattctcttcccttaaaaacgatcta
atggcagacggccttaaggacctcgatgccttaaaagaaaggttcaaaaagcttaaaggt
caaatagaaaaagaagaatccttacaaaagtctgccagagaatatagaaagcaactggag
agcttaaggcttcaaatagaaaatggtcaacagcaactgaaggtaggcgagcaacaaaca
atagaactaaccagcagattaaaagcaaaagaggaggaaataagcgacaaaaacttcagc
aatggatacatgcaatcctccactgaaaccatcaaacaaacaatagccactgtcctaaaa
gacattgaggacacagctaatttattggatggaaaacaaaaagtcctgaaagataagcgc
aacgatgaaaccactaaccttgctaacctggagaatttcaaaaacaacaaagaagaggct
gttttgaagctagaaactttaaacagtaaatacgatgaattgaaaaccaagctaggtcaa
accgaccaaaaactactcgacaaacttttcaatagcaacctggatgaggagaagtttgac
cgggagattagagagtatgaaaaagaatgttctatcgtacaatcccatttgagctcatta
gaagcagaagagggagttaagaactttgaccaggcacatttcaatttacttcaggaagag
tttgattcaaagaaagccgagctagatgctatcaataaaaaaacgataaatctggaccgt
gatatttctgagctaaaagaaaaactagaaacaaagaaggacttggccaagctacttgat
gccatggaaaacagggccacaaatttaaaagaattggagcaactgtttaaaggcagtggg
tttgtgaagtatgtaagcagtatttaccttaaggaattgtgcaacacggcaaataaaaga
tttacccaattgaccaaaaatagcctaagactggaaatagatgccaacaataccttttgg
gtggtagattacctgaatgaaggaaagaagcgattgttaaaaaccttgtctggaggccaa
acttttcaagcatcattgtgtttggcattggccttggctgaaaaagtaaaatccctcaac
caggctgatcaaagcttcttctttctagatgaaggttttggggccttggacagaaaatcg
cttcgtatagtatttgaaaccttaaaggctctaagacatgaaaacagaattgtgggtata
atcagtcatgttgaagaactacagcaggaaatcgaagttttcgccaatattgttttagac
gctgaaaaaggcagtcaggtcatgtacagttatcaataa
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