Capsicum annuum (peppers): 107839838
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Entry
107839838 CDS
T04646
Name
(RefSeq) pentatricopeptide repeat-containing protein At1g10270
Organism
cann
Capsicum annuum (peppers)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR
PPR_1
PPR_3
PPR_long
TPR_12
Mal_decarbox_Al
Motif
Other DBs
NCBI-GeneID:
107839838
NCBI-ProteinID:
XP_016538960
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All DBs
Position
8:158474805..158487415
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AA seq
1051 aa
AA seq
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MPLSAALLRSIRRSSALIRTQFITSLHPPPPLQNPNFLLPHRSFAFSSAEEAAAERRRRK
RRLRIEPPINALRRDPLPRGPPSPDDPRSRLPDTTSALVGPRLNLHNRVQSLIRAGDLDS
AAAVARHAIFSNTRPTVFTCNAIIGAMYRNARYSDAKALFQYFFNQYNIIPNVVSYNHLI
VSHCEAGEVDEALKVYNHIIENAPFSPSAVTYRHLTKGLIDSDRMREAVDLLREMLNKGH
GADSLVYNNLILGFLNLGNLEKANELFDELKERCTVYDGVVNATFMDWFFKQGKVKEAME
SYRSLLDKKYRMVPATCNVLLEVLLRHGRETEAWALFDAMLDDHTPPTFQAVNSDTFNLM
VNECFRLGKVSEALETFKKVGKGLKTRPFAMDVAGYNNMITRLSELEMMEEAEKIYMELC
NKSLSPDVTTYRTMIEAYVKMENVEGTLEKYTKMVEAGLRVIPVYAEKWFNFLIEKGKVA
ECVPILTKMAEREPRPDVTTYDIVIRALCGEGNYDASSNLVIQMINYGVGISSSLREFLL
ETFGNQGRREEIERVLASKPTYIPPPTPPRGQVPWLSQLPRQSAGTSHAPGQQTSPASLS
SQVQGQSSAHNSMGHQNLRPSFVGGQQQASPTSFVGGQGSSQMQGQQSAPNPGWQQASPP
SFVAGQGSSQMQGQQYSPNPRWQQTSPPPFVAGQGSSQMQGQQFAPNPRWQQASPPSYIA
GQGSHQMHGQQSDPNPRWQQASPPSSIAGQESQQMQGHQSEPNPRWQQASPPSFVAGQGL
HQMHGQQSEPYPRWQQTSPSSFVAGQGSHQTQGQQPAPNPRWQQASPPSFIAGQGSQQMQ
GQPSTFGRNSHQASPPFIQQGVSPPSFMAGQGSQQTQGQLSAFARNVQQASPSFVPQREA
SSHSFMAGQGSQQMQGHPPPSFVPGDASHVQGQPSGFAHVPQWSSPRTYMAGQVGNHQMQ
GASGSTQTTHKASPYSIDGQRAPSMQGLASGPAHAPLNEISHTSQTVRGLGSAFAQMPEQ
NVRHQATGEASSQGDNIEQYQYPEVARQGRM
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgccactctccgccgcactcctccgctccatccgccgttcctccgccctcatcagaact
caattcataacctccctccaccctccaccacctctacaaaaccctaatttcctcctccct
caccgatccttcgcattttcctccgccgaagaagccgccgccgaacgccgccgtcgcaag
cgtcgcctccgtattgaaccaccaatcaacgctctccgtcgcgatccactacctagggga
ccaccttctcccgatgaccctcgatcccgtctccccgataccacgtcagcattggtgggc
ccccggcttaaccttcacaatcgggtgcagtctcttatacgtgctggagatttggattcc
gcggccgccgttgctcggcatgctattttttcgaatacacggccgactgtgtttacgtgt
aatgctataatcggtgctatgtatcgtaatgctcggtatagtgatgctaaagcgctgttt
cagtacttctttaatcagtataatattattccgaatgttgtgtcgtataatcatttaatt
gtctcacattgcgaagctggtgaggtggatgaagctttgaaagtatacaatcacattatt
gaaaatgcgcctttcagtccgtctgctgttacgtatcgtcatcttacgaagggattgatt
gattctgaccggatgagggaggctgtcgatttgcttagggaaatgcttaataaaggacat
ggtgctgattcgttagtttataataatttgattttggggttcttgaatttgggtaattta
gagaaagcgaatgagctttttgatgagttgaaagagaggtgtactgtttatgatggggtg
gtgaatgctacttttatggactggtttttcaagcaggggaaggtaaaagaggctatggaa
tcatatcgatctcttcttgataagaagtataggatggttccggcaacttgtaatgtgctg
ttggaggtgttgttgaggcatgggagggaaactgaggcgtgggcgttgtttgatgcaatg
ctggatgatcacacaccaccaacatttcaggctgtgaattccgacacttttaatttaatg
gtgaatgagtgttttaggttagggaaggtctcagaggcattggagaccttcaagaaggtg
gggaagggcctcaagaccagaccttttgcgatggacgtagctggttataataatatgata
acaagactttctgagcttgaaatgatggaggaagcagaaaaaatttatatggagttgtgt
aataagtcgttgagcccggatgtcacaacttataggaccatgattgaggcatatgtgaag
atggagaatgttgaaggcaccttggagaagtacacaaagatggtggaggcaggactgaga
gtcattccagtctatgctgaaaagtggtttaatttcttgattgagaaaggcaaggttgct
gagtgcgtgcctattctcaccaagatggctgagagagaaccaagacctgatgtgacaaca
tatgatattgtgattagggcactctgtggggaaggtaattatgatgcaagttccaattta
gtaattcagatgataaactatggtgttggtatctccagttcccttagggagttcctctta
gaaacttttggtaaccaaggtcgtcgtgaggagattgaaagagttttggcttcaaaacct
acttacattccacctcctacgccacctagaggtcaagttccatggctttcacaattgcct
agacaatcagcaggaacttctcatgctccaggacagcagacatcaccagcttcgttatca
tcacaagtgcaaggtcagtcttcagctcacaattcaatggggcatcaaaatttacgtccc
tcttttgttggaggacagcaacaagcttctccaacctctttcgttggaggacaaggatca
tcacaaatgcaaggccagcagtcggcacctaatccagggtggcaacaagcttctccgccc
tcttttgttgctggacaaggatcatcacaaatgcaaggccagcagtattcacctaatcca
aggtggcaacaaacttcaccacctccttttgttgctggacaaggatcatcacaaatgcaa
ggccagcagtttgcacctaatccaaggtggcaacaagcttcaccaccatcttatattgct
ggacaaggatcacatcaaatgcatggccagcagtcagatcctaatccaaggtggcaacaa
gcttcgccaccctcttctattgctggacaagaatcacagcaaatgcaaggccatcagtca
gaacctaatccaaggtggcaacaagcttcaccaccctcttttgttgctggacaaggattg
catcaaatgcatggccagcagtcagaaccttatccaaggtggcaacaaacttcaccatcc
tcttttgttgctggacaaggatcacatcagacgcaaggccagcagccagcacctaatcca
aggtggcaacaagcttcaccaccctcttttattgctggacaaggatcacagcaaatgcaa
ggtcagccatcaacttttggacgaaattcacatcaggcatcacctccttttatccaacaa
ggagtttcaccaccgtctttcatggctggacaaggatcacagcagacgcaaggtcagcta
tcagcttttgcaagaaatgtgcaacaagcatcaccttctttcgttccacagcgagaagct
tcatcacactctttcatggctggacagggatcacaacaaatgcaaggtcatccaccacct
tccttcgtgccaggtgatgcttctcatgtgcaaggtcagccatcaggttttgcacatgtt
ccacaatggtcgtcaccgcgcacttatatggcaggacaagtaggaaaccatcaaatgcaa
ggtgcatcaggttccacacaaactacacataaggcatcaccttattccatagatggacaa
agagccccttcaatgcaaggtttggcatcgggacctgctcatgctccgctaaatgaaatc
tcacacacatcccaaacagttagaggtctgggatcagcttttgcacaaatgcctgagcaa
aatgtaagacatcaagctacaggagaggcctcatcccaaggggacaatattgagcaatac
caatacccggaagtggcacgccaagggagaatgtaa
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